Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:77797698-79228336

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp385b 2 77410622 to 77817706 407084 - protein coding gene zinc finger protein 385B
Cpgi11837 2 77815869 to 77817328 1459 CpG island CpG island 11837
Tssr24865 2 77816593 to 77816628 35 - TSS region transcription start site region 24865
Tssr24866 2 77816680 to 77816691 11 - TSS region transcription start site region 24866
Tssr24867 2 77816710 to 77816727 17 - TSS region transcription start site region 24867
Tssr24868 2 77816736 to 77816748 12 - TSS region transcription start site region 24868
Tssr24869 2 77816758 to 77816815 57 - TSS region transcription start site region 24869
Tssr24870 2 77816879 to 77816931 52 - TSS region transcription start site region 24870
Tssr24871 2 77817425 to 77817462 37 - TSS region transcription start site region 24871
Tssr24872 2 77817491 to 77817494 3 - TSS region transcription start site region 24872
Tssr24873 2 77817668 to 77817682 14 - TSS region transcription start site region 24873
Gm13661 2 77840616 to 77842936 2320 + lincRNA gene predicted gene 13661
Gm13727 2 77879753 to 77881467 1714 - unclassified non-coding RNA gene predicted gene 13727
Cwc22 2 77895653 to 77946356 50703 - protein coding gene CWC22 spliceosome-associated protein
Cpgi11838 2 77945740 to 77946475 735 CpG island CpG island 11838
Tssr24874 2 77946183 to 77946199 16 - TSS region transcription start site region 24874
Tssr24875 2 77946314 to 77946327 13 - TSS region transcription start site region 24875
Tssr24876 2 77946331 to 77946373 42 - TSS region transcription start site region 24876
Tssr24877 2 77946376 to 77946392 16 - TSS region transcription start site region 24877
Gm13726 2 77962269 to 77963062 793 - pseudogene predicted gene 13726
Tssr18512 2 78051155 to 78051181 26 + TSS region transcription start site region 18512
4930440I19Rik 2 78051177 to 78194430 143253 + lincRNA gene RIKEN cDNA 4930440I19 gene
Tssr18513 2 78051220 to 78051228 8 + TSS region transcription start site region 18513
Tssr18514 2 78214787 to 78214792 5 + TSS region transcription start site region 18514
D2Ucl6 2 78235111 to 78235309 198 DNA segment DNA segment, Chr 2, University College London 6
Gm14461 2 78237547 to 78302230 64683 + lincRNA gene predicted gene 14461
Gm39864 2 78266034 to 78272039 6005 + lncRNA gene predicted gene, 39864
Tssr18515 2 78293160 to 78293311 151 + TSS region transcription start site region 18515
Tssr18516 2 78304683 to 78304691 8 + TSS region transcription start site region 18516
Tssr18517 2 78357624 to 78357630 6 + TSS region transcription start site region 18517
Tssr18518 2 78369986 to 78369990 4 + TSS region transcription start site region 18518
Gm46750 2 78387873 to 78421131 33258 + lncRNA gene predicted gene, 46750
Gm14460 2 78512698 to 78513336 638 - pseudogene predicted gene 14460
D2Mit159 2 78516768 to 78516883 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 159
Gm23149 2 78550508 to 78550737 229 - unclassified non-coding RNA gene predicted gene, 23149
Gm14464 2 78597669 to 78598922 1253 + pseudogene predicted gene 14464
Gm14463 2 78657429 to 78657926 497 + pseudogene predicted gene 14463
Tssr18519 2 78709501 to 78709508 7 + TSS region transcription start site region 18519
Gm39865 2 78750919 to 78828785 77866 + lncRNA gene predicted gene, 39865
Gm17014 2 78845286 to 78845453 167 - pseudogene predicted gene 17014
Tssr18520 2 78845469 to 78845498 29 + TSS region transcription start site region 18520
4930401B11Rik 2 78845491 to 78846581 1090 unclassified gene RIKEN cDNA 4930401B11 gene
Ube2e3 2 78868243 to 78921288 53045 + protein coding gene ubiquitin-conjugating enzyme E2E 3
Cpgi11839 2 78868341 to 78869955 1614 CpG island CpG island 11839
Tssr18521 2 78868725 to 78868756 31 + TSS region transcription start site region 18521
Tssr18522 2 78868795 to 78868808 13 + TSS region transcription start site region 18522
Tssr18523 2 78869009 to 78869109 100 + TSS region transcription start site region 18523
Tssr18524 2 78869120 to 78869142 22 + TSS region transcription start site region 18524
Tssr18525 2 78869152 to 78869163 11 + TSS region transcription start site region 18525
Tssr18526 2 78869201 to 78869262 61 + TSS region transcription start site region 18526
Tssr18527 2 78869298 to 78869321 23 + TSS region transcription start site region 18527
Tssr18528 2 78869345 to 78869376 31 + TSS region transcription start site region 18528
Tssr18529 2 78869482 to 78869511 29 + TSS region transcription start site region 18529
Tssr18530 2 78872400 to 78872419 19 + TSS region transcription start site region 18530
Tssr18531 2 78884300 to 78884304 4 + TSS region transcription start site region 18531
Tssr18532 2 78918407 to 78918410 3 + TSS region transcription start site region 18532
Tssr18533 2 78923490 to 78923494 4 + TSS region transcription start site region 18533
BC030308 2 78925403 to 78928691 3288 unclassified gene cDNA sequence BC030308
Gm37004 2 78972672 to 79098851 126179 + unclassified gene predicted gene, 37004
Tssr18534 2 78972728 to 78972737 9 + TSS region transcription start site region 18534
Tssr24878 2 78973024 to 78973035 11 - TSS region transcription start site region 24878
Tssr24879 2 78973049 to 78973057 8 - TSS region transcription start site region 24879
Gm14466 2 79022821 to 79023271 450 - pseudogene predicted gene 14466
Gm14469 2 79038533 to 79038734 201 - pseudogene predicted gene 14469
Tssr18535 2 79065558 to 79065569 11 + TSS region transcription start site region 18535
Gm35748 2 79122339 to 79123362 1023 + lncRNA gene predicted gene, 35748
Tssr18536 2 79122710 to 79122721 11 + TSS region transcription start site region 18536
Tssr18537 2 79122725 to 79122753 28 + TSS region transcription start site region 18537
Tssr18538 2 79122764 to 79122788 24 + TSS region transcription start site region 18538
Tssr18539 2 79122790 to 79122811 21 + TSS region transcription start site region 18539
Tssr18540 2 79126662 to 79126685 23 + TSS region transcription start site region 18540
Tssr24880 2 79132371 to 79132379 8 - TSS region transcription start site region 24880
Gm14465 2 79161047 to 79161595 548 - pseudogene predicted gene 14465