Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:77117668-78517682

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc141 2 77009902 to 77170636 160734 - protein coding gene coiled-coil domain containing 141
Tssr24837 2 77123798 to 77123804 6 - TSS region transcription start site region 24837
Tssr24838 2 77147150 to 77147152 2 - TSS region transcription start site region 24838
Gm39861 2 77161979 to 77163782 1803 - lncRNA gene predicted gene, 39861
Cpgi11833 2 77170234 to 77170584 350 CpG island CpG island 11833
Tssr24839 2 77170534 to 77170576 42 - TSS region transcription start site region 24839
Tssr24840 2 77170577 to 77170589 12 - TSS region transcription start site region 24840
Tssr24841 2 77170592 to 77170645 53 - TSS region transcription start site region 24841
Sestd1 2 77180340 to 77280592 100252 - protein coding gene SEC14 and spectrin domains 1
Tssr24842 2 77184484 to 77184487 3 - TSS region transcription start site region 24842
Gm17898 2 77193899 to 77194500 601 + pseudogene predicted gene, 17898
Gm35266 2 77199597 to 77206199 6602 - lncRNA gene predicted gene, 35266
D2Mit299 2 77200891 to 77200990 99 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 299
Gm13650 2 77255991 to 77256423 432 - pseudogene predicted gene 13650
Tssr24843 2 77259523 to 77259556 33 - TSS region transcription start site region 24843
Tssr24844 2 77259818 to 77259832 14 - TSS region transcription start site region 24844
Tssr24845 2 77259833 to 77259848 15 - TSS region transcription start site region 24845
Tssr24846 2 77260018 to 77260062 44 - TSS region transcription start site region 24846
Tssr24847 2 77278868 to 77278876 8 - TSS region transcription start site region 24847
Cpgi11834 2 77279846 to 77281166 1320 CpG island CpG island 11834
Tssr24848 2 77280554 to 77280565 11 - TSS region transcription start site region 24848
Tssr24849 2 77280569 to 77280580 11 - TSS region transcription start site region 24849
Tssr24850 2 77280589 to 77280648 59 - TSS region transcription start site region 24850
Tssr24851 2 77280765 to 77280848 83 - TSS region transcription start site region 24851
Tssr24852 2 77281058 to 77281082 24 - TSS region transcription start site region 24852
Tssr18509 2 77291023 to 77291028 5 + TSS region transcription start site region 18509
Gm13651 2 77291331 to 77292440 1109 + pseudogene predicted gene 13651
Tssr24853 2 77313964 to 77313986 22 - TSS region transcription start site region 24853
Gm13943 2 77314751 to 77317035 2284 + lincRNA gene predicted gene 13943
Tssr24854 2 77316883 to 77316901 18 - TSS region transcription start site region 24854
Tssr24855 2 77317048 to 77317063 15 - TSS region transcription start site region 24855
Gm35317 2 77319721 to 77323910 4189 - lncRNA gene predicted gene, 35317
Tssr544 2 77335069 to 77335070 1 + TSS region transcription start site region 544
Gm13649 2 77335359 to 77335964 605 + pseudogene predicted gene 13649
Zfp385b 2 77410622 to 77817706 407084 - protein coding gene zinc finger protein 385B
Cpgi11835 2 77411928 to 77412106 178 CpG island CpG island 11835
Tssr18510 2 77462640 to 77462647 7 + TSS region transcription start site region 18510
Gm13944 2 77462669 to 77480938 18269 + antisense lncRNA gene predicted gene 13944
Tssr24856 2 77466538 to 77466561 23 - TSS region transcription start site region 24856
Tssr24857 2 77519536 to 77519549 13 - TSS region transcription start site region 24857
Tssr24858 2 77519565 to 77519647 82 - TSS region transcription start site region 24858
Tssr24859 2 77520709 to 77520713 4 - TSS region transcription start site region 24859
D2Mit183 2 77559349 to 77559489 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 183
Gm17957 2 77585181 to 77585729 548 - pseudogene predicted gene, 17957
Cpgi11836 2 77589674 to 77589878 204 CpG island CpG island 11836
Tssr24860 2 77621278 to 77621286 8 - TSS region transcription start site region 24860
Gm17927 2 77660284 to 77661332 1048 - pseudogene predicted gene, 17927
Tssr24861 2 77703252 to 77703265 13 - TSS region transcription start site region 24861
Tssr24862 2 77703305 to 77703325 20 - TSS region transcription start site region 24862
Tssr24863 2 77703375 to 77703417 42 - TSS region transcription start site region 24863
Tssr24864 2 77706062 to 77706073 11 - TSS region transcription start site region 24864
Tssr18511 2 77725753 to 77725767 14 + TSS region transcription start site region 18511
Gm35431 2 77761144 to 77777684 16540 + lncRNA gene predicted gene, 35431
Cpgi11837 2 77815869 to 77817328 1459 CpG island CpG island 11837
Tssr24865 2 77816593 to 77816628 35 - TSS region transcription start site region 24865
Tssr24866 2 77816680 to 77816691 11 - TSS region transcription start site region 24866
Tssr24867 2 77816710 to 77816727 17 - TSS region transcription start site region 24867
Tssr24868 2 77816736 to 77816748 12 - TSS region transcription start site region 24868
Tssr24869 2 77816758 to 77816815 57 - TSS region transcription start site region 24869
Tssr24870 2 77816879 to 77816931 52 - TSS region transcription start site region 24870
Tssr24871 2 77817425 to 77817462 37 - TSS region transcription start site region 24871
Tssr24872 2 77817491 to 77817494 3 - TSS region transcription start site region 24872
Tssr24873 2 77817668 to 77817682 14 - TSS region transcription start site region 24873
Gm13661 2 77840616 to 77842936 2320 + lincRNA gene predicted gene 13661
Gm13727 2 77879753 to 77881467 1714 - unclassified non-coding RNA gene predicted gene 13727
Cwc22 2 77895653 to 77946356 50703 - protein coding gene CWC22 spliceosome-associated protein
Cpgi11838 2 77945740 to 77946475 735 CpG island CpG island 11838
Tssr24874 2 77946183 to 77946199 16 - TSS region transcription start site region 24874
Tssr24875 2 77946314 to 77946327 13 - TSS region transcription start site region 24875
Tssr24876 2 77946331 to 77946373 42 - TSS region transcription start site region 24876
Tssr24877 2 77946376 to 77946392 16 - TSS region transcription start site region 24877
Gm13726 2 77962269 to 77963062 793 - pseudogene predicted gene 13726
Tssr18512 2 78051155 to 78051181 26 + TSS region transcription start site region 18512
4930440I19Rik 2 78051177 to 78194430 143253 + lincRNA gene RIKEN cDNA 4930440I19 gene
Tssr18513 2 78051220 to 78051228 8 + TSS region transcription start site region 18513
Tssr18514 2 78214787 to 78214792 5 + TSS region transcription start site region 18514
D2Ucl6 2 78235111 to 78235309 198 DNA segment DNA segment, Chr 2, University College London 6
Gm14461 2 78237547 to 78302230 64683 + lincRNA gene predicted gene 14461
Gm39864 2 78266034 to 78272039 6005 + lncRNA gene predicted gene, 39864
Tssr18515 2 78293160 to 78293311 151 + TSS region transcription start site region 18515
Tssr18516 2 78304683 to 78304691 8 + TSS region transcription start site region 18516
Tssr18517 2 78357624 to 78357630 6 + TSS region transcription start site region 18517
Tssr18518 2 78369986 to 78369990 4 + TSS region transcription start site region 18518
Gm46750 2 78387873 to 78421131 33258 + lncRNA gene predicted gene, 46750
Gm14460 2 78512698 to 78513336 638 - pseudogene predicted gene 14460
D2Mit159 2 78516768 to 78516883 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 159