Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:76839753-78921467

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187 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttn 2 76703980 to 76982547 278567 - protein coding gene titin
Tssr24767 2 76841147 to 76841160 13 - TSS region transcription start site region 24767
Tssr24768 2 76841216 to 76841227 11 - TSS region transcription start site region 24768
Tssr24769 2 76843618 to 76843620 2 - TSS region transcription start site region 24769
Tssr24770 2 76846503 to 76846523 20 - TSS region transcription start site region 24770
D2Mit93 2 76848414 to 76848554 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 93
Tssr24771 2 76848897 to 76848908 11 - TSS region transcription start site region 24771
Tssr24772 2 76848950 to 76848962 12 - TSS region transcription start site region 24772
Tssr24773 2 76849006 to 76849017 11 - TSS region transcription start site region 24773
Tssr24774 2 76849635 to 76849648 13 - TSS region transcription start site region 24774
Tssr24775 2 76851674 to 76851699 25 - TSS region transcription start site region 24775
Tssr24776 2 76851715 to 76851753 38 - TSS region transcription start site region 24776
Tssr24777 2 76853644 to 76853655 11 - TSS region transcription start site region 24777
Tssr24778 2 76854415 to 76854440 25 - TSS region transcription start site region 24778
Tssr24779 2 76856330 to 76856343 13 - TSS region transcription start site region 24779
Tssr24780 2 76856349 to 76856373 24 - TSS region transcription start site region 24780
Tssr24781 2 76857182 to 76857200 18 - TSS region transcription start site region 24781
Tssr24782 2 76863317 to 76863344 27 - TSS region transcription start site region 24782
Tssr24783 2 76863365 to 76863403 38 - TSS region transcription start site region 24783
Tssr24784 2 76863496 to 76863517 21 - TSS region transcription start site region 24784
Tssr24785 2 76867191 to 76867208 17 - TSS region transcription start site region 24785
Tssr24786 2 76867218 to 76867233 15 - TSS region transcription start site region 24786
Tssr24787 2 76867236 to 76867248 12 - TSS region transcription start site region 24787
Tssr24788 2 76868037 to 76868057 20 - TSS region transcription start site region 24788
Tssr24789 2 76868069 to 76868090 21 - TSS region transcription start site region 24789
Tssr24790 2 76868375 to 76868393 18 - TSS region transcription start site region 24790
Tssr24791 2 76868412 to 76868428 16 - TSS region transcription start site region 24791
Tssr24792 2 76868450 to 76868459 9 - TSS region transcription start site region 24792
Tssr24793 2 76870383 to 76870392 9 - TSS region transcription start site region 24793
Tssr24794 2 76870399 to 76870418 19 - TSS region transcription start site region 24794
Tssr24795 2 76870486 to 76870511 25 - TSS region transcription start site region 24795
Tssr24796 2 76872834 to 76872853 19 - TSS region transcription start site region 24796
Tssr24797 2 76872865 to 76872879 14 - TSS region transcription start site region 24797
Tssr24798 2 76881258 to 76881261 3 - TSS region transcription start site region 24798
Tssr24799 2 76886371 to 76886376 5 - TSS region transcription start site region 24799
Tssr24800 2 76889753 to 76889776 23 - TSS region transcription start site region 24800
Tssr24801 2 76890154 to 76890175 21 - TSS region transcription start site region 24801
Tssr24802 2 76891470 to 76891478 8 - TSS region transcription start site region 24802
Tssr24803 2 76894730 to 76894743 13 - TSS region transcription start site region 24803
Tssr24804 2 76904869 to 76904873 4 - TSS region transcription start site region 24804
Tssr24805 2 76905617 to 76905629 12 - TSS region transcription start site region 24805
Tssr24806 2 76905652 to 76905665 13 - TSS region transcription start site region 24806
Tssr24807 2 76905808 to 76905822 14 - TSS region transcription start site region 24807
Tssr24808 2 76905824 to 76905835 11 - TSS region transcription start site region 24808
Tssr24809 2 76906314 to 76906321 7 - TSS region transcription start site region 24809
Tssr24810 2 76906703 to 76906706 3 - TSS region transcription start site region 24810
Tssr24811 2 76908046 to 76908066 20 - TSS region transcription start site region 24811
Tssr24812 2 76928926 to 76928952 26 - TSS region transcription start site region 24812
Tssr24813 2 76938403 to 76938413 10 - TSS region transcription start site region 24813
Tssr24814 2 76945244 to 76945252 8 - TSS region transcription start site region 24814
Tssr24815 2 76945383 to 76945394 11 - TSS region transcription start site region 24815
Tssr24816 2 76949050 to 76949063 13 - TSS region transcription start site region 24816
Tssr24817 2 76954652 to 76954667 15 - TSS region transcription start site region 24817
Tssr24818 2 76961700 to 76961711 11 - TSS region transcription start site region 24818
D2Ucl5 2 76963920 to 76964151 231 DNA segment DNA segment, Chr 2, University College London 5
Tssr24819 2 76967092 to 76967105 13 - TSS region transcription start site region 24819
Tssr18508 2 76968447 to 76968471 24 + TSS region transcription start site region 18508
Tssr24820 2 76968457 to 76968470 13 - TSS region transcription start site region 24820
Tssr24821 2 76968476 to 76968502 26 - TSS region transcription start site region 24821
Tssr24822 2 76968503 to 76968532 29 - TSS region transcription start site region 24822
Tssr24823 2 76969164 to 76969187 23 - TSS region transcription start site region 24823
Tssr24824 2 76969191 to 76969226 35 - TSS region transcription start site region 24824
Tssr24825 2 76969656 to 76969681 25 - TSS region transcription start site region 24825
Tssr24826 2 76969708 to 76969721 13 - TSS region transcription start site region 24826
Tssr24827 2 76969725 to 76969742 17 - TSS region transcription start site region 24827
Tssr24828 2 76969813 to 76969825 12 - TSS region transcription start site region 24828
Tssr24829 2 76969925 to 76969937 12 - TSS region transcription start site region 24829
Tssr24830 2 76975061 to 76975080 19 - TSS region transcription start site region 24830
Tssr24831 2 76975100 to 76975122 22 - TSS region transcription start site region 24831
Tssr24832 2 76977151 to 76977185 34 - TSS region transcription start site region 24832
Tssr24833 2 76977189 to 76977206 17 - TSS region transcription start site region 24833
Tssr24834 2 76982539 to 76982553 14 - TSS region transcription start site region 24834
D2Mit158 2 76984002 to 76984148 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 158
Ccdc141 2 77009902 to 77170636 160734 - protein coding gene coiled-coil domain containing 141
Tssr24835 2 77014201 to 77014207 6 - TSS region transcription start site region 24835
Tssr24836 2 77014388 to 77014392 4 - TSS region transcription start site region 24836
D2Mit246 2 77019079 to 77019222 143 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 246
Gm39862 2 77061793 to 77070731 8938 - lncRNA gene predicted gene, 39862
Gm44360 2 77074271 to 77074352 81 - miRNA gene predicted gene, 44360
Tssr24837 2 77123798 to 77123804 6 - TSS region transcription start site region 24837
Tssr24838 2 77147150 to 77147152 2 - TSS region transcription start site region 24838
Gm39861 2 77161979 to 77163782 1803 - lncRNA gene predicted gene, 39861
Cpgi11833 2 77170234 to 77170584 350 CpG island CpG island 11833
Tssr24839 2 77170534 to 77170576 42 - TSS region transcription start site region 24839
Tssr24840 2 77170577 to 77170589 12 - TSS region transcription start site region 24840
Tssr24841 2 77170592 to 77170645 53 - TSS region transcription start site region 24841
Sestd1 2 77180340 to 77280592 100252 - protein coding gene SEC14 and spectrin domains 1
Tssr24842 2 77184484 to 77184487 3 - TSS region transcription start site region 24842
Gm17898 2 77193899 to 77194500 601 + pseudogene predicted gene, 17898
Gm35266 2 77199597 to 77206199 6602 - lncRNA gene predicted gene, 35266
D2Mit299 2 77200891 to 77200990 99 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 299
Gm13650 2 77255991 to 77256423 432 - pseudogene predicted gene 13650
Tssr24843 2 77259523 to 77259556 33 - TSS region transcription start site region 24843
Tssr24844 2 77259818 to 77259832 14 - TSS region transcription start site region 24844
Tssr24845 2 77259833 to 77259848 15 - TSS region transcription start site region 24845
Tssr24846 2 77260018 to 77260062 44 - TSS region transcription start site region 24846
Tssr24847 2 77278868 to 77278876 8 - TSS region transcription start site region 24847
Cpgi11834 2 77279846 to 77281166 1320 CpG island CpG island 11834
Tssr24848 2 77280554 to 77280565 11 - TSS region transcription start site region 24848
Tssr24849 2 77280569 to 77280580 11 - TSS region transcription start site region 24849
Tssr24850 2 77280589 to 77280648 59 - TSS region transcription start site region 24850
Tssr24851 2 77280765 to 77280848 83 - TSS region transcription start site region 24851
Tssr24852 2 77281058 to 77281082 24 - TSS region transcription start site region 24852
Tssr18509 2 77291023 to 77291028 5 + TSS region transcription start site region 18509
Gm13651 2 77291331 to 77292440 1109 + pseudogene predicted gene 13651
Tssr24853 2 77313964 to 77313986 22 - TSS region transcription start site region 24853
Gm13943 2 77314751 to 77317035 2284 + lincRNA gene predicted gene 13943
Tssr24854 2 77316883 to 77316901 18 - TSS region transcription start site region 24854
Tssr24855 2 77317048 to 77317063 15 - TSS region transcription start site region 24855
Gm35317 2 77319721 to 77323910 4189 - lncRNA gene predicted gene, 35317
Tssr544 2 77335069 to 77335070 1 + TSS region transcription start site region 544
Gm13649 2 77335359 to 77335964 605 + pseudogene predicted gene 13649
Zfp385b 2 77410622 to 77817706 407084 - protein coding gene zinc finger protein 385B
Cpgi11835 2 77411928 to 77412106 178 CpG island CpG island 11835
Tssr18510 2 77462640 to 77462647 7 + TSS region transcription start site region 18510
Gm13944 2 77462669 to 77480938 18269 + antisense lncRNA gene predicted gene 13944
Tssr24856 2 77466538 to 77466561 23 - TSS region transcription start site region 24856
Tssr24857 2 77519536 to 77519549 13 - TSS region transcription start site region 24857
Tssr24858 2 77519565 to 77519647 82 - TSS region transcription start site region 24858
Tssr24859 2 77520709 to 77520713 4 - TSS region transcription start site region 24859
D2Mit183 2 77559349 to 77559489 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 183
Gm17957 2 77585181 to 77585729 548 - pseudogene predicted gene, 17957
Cpgi11836 2 77589674 to 77589878 204 CpG island CpG island 11836
Tssr24860 2 77621278 to 77621286 8 - TSS region transcription start site region 24860
Gm17927 2 77660284 to 77661332 1048 - pseudogene predicted gene, 17927
Tssr24861 2 77703252 to 77703265 13 - TSS region transcription start site region 24861
Tssr24862 2 77703305 to 77703325 20 - TSS region transcription start site region 24862
Tssr24863 2 77703375 to 77703417 42 - TSS region transcription start site region 24863
Tssr24864 2 77706062 to 77706073 11 - TSS region transcription start site region 24864
Tssr18511 2 77725753 to 77725767 14 + TSS region transcription start site region 18511
Gm35431 2 77761144 to 77777684 16540 + lncRNA gene predicted gene, 35431
Cpgi11837 2 77815869 to 77817328 1459 CpG island CpG island 11837
Tssr24865 2 77816593 to 77816628 35 - TSS region transcription start site region 24865
Tssr24866 2 77816680 to 77816691 11 - TSS region transcription start site region 24866
Tssr24867 2 77816710 to 77816727 17 - TSS region transcription start site region 24867
Tssr24868 2 77816736 to 77816748 12 - TSS region transcription start site region 24868
Tssr24869 2 77816758 to 77816815 57 - TSS region transcription start site region 24869
Tssr24870 2 77816879 to 77816931 52 - TSS region transcription start site region 24870
Tssr24871 2 77817425 to 77817462 37 - TSS region transcription start site region 24871
Tssr24872 2 77817491 to 77817494 3 - TSS region transcription start site region 24872
Tssr24873 2 77817668 to 77817682 14 - TSS region transcription start site region 24873
Gm13661 2 77840616 to 77842936 2320 + lincRNA gene predicted gene 13661
Gm13727 2 77879753 to 77881467 1714 - unclassified non-coding RNA gene predicted gene 13727
Cwc22 2 77895653 to 77946356 50703 - protein coding gene CWC22 spliceosome-associated protein
Cpgi11838 2 77945740 to 77946475 735 CpG island CpG island 11838
Tssr24874 2 77946183 to 77946199 16 - TSS region transcription start site region 24874
Tssr24875 2 77946314 to 77946327 13 - TSS region transcription start site region 24875
Tssr24876 2 77946331 to 77946373 42 - TSS region transcription start site region 24876
Tssr24877 2 77946376 to 77946392 16 - TSS region transcription start site region 24877
Gm13726 2 77962269 to 77963062 793 - pseudogene predicted gene 13726
Tssr18512 2 78051155 to 78051181 26 + TSS region transcription start site region 18512
4930440I19Rik 2 78051177 to 78194430 143253 + lincRNA gene RIKEN cDNA 4930440I19 gene
Tssr18513 2 78051220 to 78051228 8 + TSS region transcription start site region 18513
Tssr18514 2 78214787 to 78214792 5 + TSS region transcription start site region 18514
D2Ucl6 2 78235111 to 78235309 198 DNA segment DNA segment, Chr 2, University College London 6
Gm14461 2 78237547 to 78302230 64683 + lincRNA gene predicted gene 14461
Gm39864 2 78266034 to 78272039 6005 + lncRNA gene predicted gene, 39864
Tssr18515 2 78293160 to 78293311 151 + TSS region transcription start site region 18515
Tssr18516 2 78304683 to 78304691 8 + TSS region transcription start site region 18516
Tssr18517 2 78357624 to 78357630 6 + TSS region transcription start site region 18517
Tssr18518 2 78369986 to 78369990 4 + TSS region transcription start site region 18518
Gm46750 2 78387873 to 78421131 33258 + lncRNA gene predicted gene, 46750
Gm14460 2 78512698 to 78513336 638 - pseudogene predicted gene 14460
D2Mit159 2 78516768 to 78516883 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 159
Gm23149 2 78550508 to 78550737 229 - unclassified non-coding RNA gene predicted gene, 23149
Gm14464 2 78597669 to 78598922 1253 + pseudogene predicted gene 14464
Gm14463 2 78657429 to 78657926 497 + pseudogene predicted gene 14463
Tssr18519 2 78709501 to 78709508 7 + TSS region transcription start site region 18519
Gm39865 2 78750919 to 78828785 77866 + lncRNA gene predicted gene, 39865
Gm17014 2 78845286 to 78845453 167 - pseudogene predicted gene 17014
Tssr18520 2 78845469 to 78845498 29 + TSS region transcription start site region 18520
4930401B11Rik 2 78845491 to 78846581 1090 unclassified gene RIKEN cDNA 4930401B11 gene
Ube2e3 2 78868243 to 78921288 53045 + protein coding gene ubiquitin-conjugating enzyme E2E 3
Cpgi11839 2 78868341 to 78869955 1614 CpG island CpG island 11839
Tssr18521 2 78868725 to 78868756 31 + TSS region transcription start site region 18521
Tssr18522 2 78868795 to 78868808 13 + TSS region transcription start site region 18522
Tssr18523 2 78869009 to 78869109 100 + TSS region transcription start site region 18523
Tssr18524 2 78869120 to 78869142 22 + TSS region transcription start site region 18524
Tssr18525 2 78869152 to 78869163 11 + TSS region transcription start site region 18525
Tssr18526 2 78869201 to 78869262 61 + TSS region transcription start site region 18526
Tssr18527 2 78869298 to 78869321 23 + TSS region transcription start site region 18527
Tssr18528 2 78869345 to 78869376 31 + TSS region transcription start site region 18528
Tssr18529 2 78869482 to 78869511 29 + TSS region transcription start site region 18529
Tssr18530 2 78872400 to 78872419 19 + TSS region transcription start site region 18530
Tssr18531 2 78884300 to 78884304 4 + TSS region transcription start site region 18531
Tssr18532 2 78918407 to 78918410 3 + TSS region transcription start site region 18532
Mohg1 2 103265478 to 76848414 -26417064 QTL modifier of hg 1