Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:76337517-76737528

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pde11a 2 75989141 to 76338774 349633 - protein coding gene phosphodiesterase 11A
Cpgi11827 2 76338591 to 76339152 561 CpG island CpG island 11827
Tssr24670 2 76338931 to 76338965 34 - TSS region transcription start site region 24670
Tssr18483 2 76344463 to 76344464 1 + TSS region transcription start site region 18483
Cyct 2 76353942 to 76360450 6508 - protein coding gene cytochrome c, testis
Tssr24671 2 76360374 to 76360391 17 - TSS region transcription start site region 24671
Tssr24672 2 76360400 to 76360414 14 - TSS region transcription start site region 24672
Tssr24673 2 76360425 to 76360439 14 - TSS region transcription start site region 24673
Tssr24674 2 76360447 to 76360463 16 - TSS region transcription start site region 24674
Cpgi11828 2 76369697 to 76370751 1054 CpG island CpG island 11828
Tssr18484 2 76369927 to 76369951 24 + TSS region transcription start site region 18484
Tssr18485 2 76369967 to 76370024 57 + TSS region transcription start site region 18485
Rbm45 2 76369984 to 76383768 13784 + protein coding gene RNA binding motif protein 45
Tssr18486 2 76370031 to 76370042 11 + TSS region transcription start site region 18486
Tssr18487 2 76370053 to 76370060 7 + TSS region transcription start site region 18487
Tssr541 2 76370335 to 76370366 31 + TSS region transcription start site region 541
Tssr18488 2 76383565 to 76383576 11 + TSS region transcription start site region 18488
B230104C14Rik 2 76388562 to 76389559 997 unclassified gene RIKEN cDNA B230104C14 gene
Cpgi11829 2 76405953 to 76407586 1633 CpG island CpG island 11829
Osbpl6 2 76406508 to 76600647 194139 + protein coding gene oxysterol binding protein-like 6
Tssr18489 2 76406529 to 76406580 51 + TSS region transcription start site region 18489
Tssr18490 2 76406581 to 76406592 11 + TSS region transcription start site region 18490
Gm23164 2 76479219 to 76479329 110 + miRNA gene predicted gene, 23164
Tssr18491 2 76499044 to 76499077 33 + TSS region transcription start site region 18491
Tssr18492 2 76499089 to 76499098 9 + TSS region transcription start site region 18492
Tssr18493 2 76499108 to 76499128 20 + TSS region transcription start site region 18493
D2Mit435 2 76533819 to 76533920 101 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 435
Tssr18494 2 76537330 to 76537335 5 + TSS region transcription start site region 18494
Tssr18495 2 76537362 to 76537375 13 + TSS region transcription start site region 18495
Tssr18496 2 76537489 to 76537502 13 + TSS region transcription start site region 18496
Tssr18497 2 76537517 to 76537528 11 + TSS region transcription start site region 18497
Tssr18498 2 76539723 to 76539745 22 + TSS region transcription start site region 18498
Tssr18499 2 76539966 to 76539979 13 + TSS region transcription start site region 18499
Prkra 2 76629898 to 76648015 18117 - protein coding gene protein kinase, interferon inducible double stranded RNA dependent activator
Cpgi11830 2 76647401 to 76648394 993 CpG island CpG island 11830
Tssr24675 2 76647971 to 76647991 20 - TSS region transcription start site region 24675
Tssr24676 2 76647992 to 76648043 51 - TSS region transcription start site region 24676
Tssr18500 2 76650264 to 76650278 14 + TSS region transcription start site region 18500
Pjvk 2 76650273 to 76658554 8281 + protein coding gene pejvakin
Fkbp7 2 76663044 to 76673116 10072 - protein coding gene FK506 binding protein 7
Cpgi11831 2 76672986 to 76673237 251 CpG island CpG island 11831
Tssr24677 2 76672994 to 76673003 9 - TSS region transcription start site region 24677
Tssr24678 2 76673039 to 76673128 89 - TSS region transcription start site region 24678
Cpgi11832 2 76674862 to 76675912 1050 CpG island CpG island 11832
Tssr18501 2 76675265 to 76675287 22 + TSS region transcription start site region 18501
Plekha3 2 76675281 to 76696828 21547 + protein coding gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
Tssr18502 2 76675290 to 76675321 31 + TSS region transcription start site region 18502
Tssr18503 2 76675322 to 76675349 27 + TSS region transcription start site region 18503
Gm39860 2 76675641 to 76680063 4422 + lncRNA gene predicted gene, 39860
Tssr18504 2 76675962 to 76675967 5 + TSS region transcription start site region 18504
Tssr18505 2 76688081 to 76688098 17 + TSS region transcription start site region 18505
Tssr18506 2 76692419 to 76692424 5 + TSS region transcription start site region 18506
Tssr18507 2 76695816 to 76695835 19 + TSS region transcription start site region 18507
Ttn 2 76703980 to 76982547 278567 - protein coding gene titin
Tssr24679 2 76704725 to 76704733 8 - TSS region transcription start site region 24679
Tssr24680 2 76709139 to 76709156 17 - TSS region transcription start site region 24680
Tssr24681 2 76709464 to 76709482 18 - TSS region transcription start site region 24681
Tssr24682 2 76709506 to 76709520 14 - TSS region transcription start site region 24682
Tssr24683 2 76709700 to 76709712 12 - TSS region transcription start site region 24683
Tssr24684 2 76709832 to 76709841 9 - TSS region transcription start site region 24684
Tssr24685 2 76709902 to 76709915 13 - TSS region transcription start site region 24685
Tssr24686 2 76710729 to 76710742 13 - TSS region transcription start site region 24686
Tssr24687 2 76711729 to 76711741 12 - TSS region transcription start site region 24687
Tssr24688 2 76712520 to 76712531 11 - TSS region transcription start site region 24688
Tssr24689 2 76712606 to 76712617 11 - TSS region transcription start site region 24689
Tssr24690 2 76713482 to 76713504 22 - TSS region transcription start site region 24690
Tssr24691 2 76713809 to 76713830 21 - TSS region transcription start site region 24691
Tssr24692 2 76713861 to 76713899 38 - TSS region transcription start site region 24692
Tssr24693 2 76715328 to 76715337 9 - TSS region transcription start site region 24693
Tssr24694 2 76715763 to 76715780 17 - TSS region transcription start site region 24694
Tssr24695 2 76718062 to 76718073 11 - TSS region transcription start site region 24695
Tssr24696 2 76718124 to 76718139 15 - TSS region transcription start site region 24696
Tssr24697 2 76718408 to 76718422 14 - TSS region transcription start site region 24697
Tssr24698 2 76718989 to 76719001 12 - TSS region transcription start site region 24698
Tssr24699 2 76719960 to 76719971 11 - TSS region transcription start site region 24699
Tssr24700 2 76720706 to 76720718 12 - TSS region transcription start site region 24700
Gm13938 2 76722776 to 76786708 63932 + antisense lncRNA gene predicted gene 13938
Tssr24701 2 76723321 to 76723334 13 - TSS region transcription start site region 24701
Tssr24702 2 76730166 to 76730185 19 - TSS region transcription start site region 24702
Tssr24703 2 76730455 to 76730464 9 - TSS region transcription start site region 24703
Tssr24704 2 76734794 to 76734819 25 - TSS region transcription start site region 24704
Tssr24705 2 76735258 to 76735266 8 - TSS region transcription start site region 24705
Tssr24706 2 76736142 to 76736154 12 - TSS region transcription start site region 24706
Tssr24707 2 76736200 to 76736217 17 - TSS region transcription start site region 24707
Tssr24708 2 76736858 to 76736872 14 - TSS region transcription start site region 24708
Tssr24709 2 76736999 to 76737014 15 - TSS region transcription start site region 24709
Tssr24710 2 76737247 to 76737258 11 - TSS region transcription start site region 24710
Tssr24711 2 76737459 to 76737471 12 - TSS region transcription start site region 24711