Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:76272330-76802335

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135 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pde11a 2 75989141 to 76338774 349633 - protein coding gene phosphodiesterase 11A
Gm44337 2 76318482 to 76318595 113 + miRNA gene predicted gene, 44337
Cpgi11827 2 76338591 to 76339152 561 CpG island CpG island 11827
Tssr24670 2 76338931 to 76338965 34 - TSS region transcription start site region 24670
Tssr18483 2 76344463 to 76344464 1 + TSS region transcription start site region 18483
Cyct 2 76353942 to 76360450 6508 - protein coding gene cytochrome c, testis
Tssr24671 2 76360374 to 76360391 17 - TSS region transcription start site region 24671
Tssr24672 2 76360400 to 76360414 14 - TSS region transcription start site region 24672
Tssr24673 2 76360425 to 76360439 14 - TSS region transcription start site region 24673
Tssr24674 2 76360447 to 76360463 16 - TSS region transcription start site region 24674
Cpgi11828 2 76369697 to 76370751 1054 CpG island CpG island 11828
Tssr18484 2 76369927 to 76369951 24 + TSS region transcription start site region 18484
Tssr18485 2 76369967 to 76370024 57 + TSS region transcription start site region 18485
Rbm45 2 76369984 to 76383768 13784 + protein coding gene RNA binding motif protein 45
Tssr18486 2 76370031 to 76370042 11 + TSS region transcription start site region 18486
Tssr18487 2 76370053 to 76370060 7 + TSS region transcription start site region 18487
Tssr541 2 76370335 to 76370366 31 + TSS region transcription start site region 541
Tssr18488 2 76383565 to 76383576 11 + TSS region transcription start site region 18488
B230104C14Rik 2 76388562 to 76389559 997 unclassified gene RIKEN cDNA B230104C14 gene
Cpgi11829 2 76405953 to 76407586 1633 CpG island CpG island 11829
Osbpl6 2 76406508 to 76600647 194139 + protein coding gene oxysterol binding protein-like 6
Tssr18489 2 76406529 to 76406580 51 + TSS region transcription start site region 18489
Tssr18490 2 76406581 to 76406592 11 + TSS region transcription start site region 18490
Gm23164 2 76479219 to 76479329 110 + miRNA gene predicted gene, 23164
Tssr18491 2 76499044 to 76499077 33 + TSS region transcription start site region 18491
Tssr18492 2 76499089 to 76499098 9 + TSS region transcription start site region 18492
Tssr18493 2 76499108 to 76499128 20 + TSS region transcription start site region 18493
D2Mit435 2 76533819 to 76533920 101 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 435
Tssr18494 2 76537330 to 76537335 5 + TSS region transcription start site region 18494
Tssr18495 2 76537362 to 76537375 13 + TSS region transcription start site region 18495
Tssr18496 2 76537489 to 76537502 13 + TSS region transcription start site region 18496
Tssr18497 2 76537517 to 76537528 11 + TSS region transcription start site region 18497
Tssr18498 2 76539723 to 76539745 22 + TSS region transcription start site region 18498
Tssr18499 2 76539966 to 76539979 13 + TSS region transcription start site region 18499
Prkra 2 76629898 to 76648015 18117 - protein coding gene protein kinase, interferon inducible double stranded RNA dependent activator
Cpgi11830 2 76647401 to 76648394 993 CpG island CpG island 11830
Tssr24675 2 76647971 to 76647991 20 - TSS region transcription start site region 24675
Tssr24676 2 76647992 to 76648043 51 - TSS region transcription start site region 24676
Tssr18500 2 76650264 to 76650278 14 + TSS region transcription start site region 18500
Pjvk 2 76650273 to 76658554 8281 + protein coding gene pejvakin
Fkbp7 2 76663044 to 76673116 10072 - protein coding gene FK506 binding protein 7
Cpgi11831 2 76672986 to 76673237 251 CpG island CpG island 11831
Tssr24677 2 76672994 to 76673003 9 - TSS region transcription start site region 24677
Tssr24678 2 76673039 to 76673128 89 - TSS region transcription start site region 24678
Cpgi11832 2 76674862 to 76675912 1050 CpG island CpG island 11832
Tssr18501 2 76675265 to 76675287 22 + TSS region transcription start site region 18501
Plekha3 2 76675281 to 76696828 21547 + protein coding gene pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
Tssr18502 2 76675290 to 76675321 31 + TSS region transcription start site region 18502
Tssr18503 2 76675322 to 76675349 27 + TSS region transcription start site region 18503
Gm39860 2 76675641 to 76680063 4422 + lncRNA gene predicted gene, 39860
Tssr18504 2 76675962 to 76675967 5 + TSS region transcription start site region 18504
Tssr18505 2 76688081 to 76688098 17 + TSS region transcription start site region 18505
Tssr18506 2 76692419 to 76692424 5 + TSS region transcription start site region 18506
Tssr18507 2 76695816 to 76695835 19 + TSS region transcription start site region 18507
Ttn 2 76703980 to 76982547 278567 - protein coding gene titin
Tssr24679 2 76704725 to 76704733 8 - TSS region transcription start site region 24679
Tssr24680 2 76709139 to 76709156 17 - TSS region transcription start site region 24680
Tssr24681 2 76709464 to 76709482 18 - TSS region transcription start site region 24681
Tssr24682 2 76709506 to 76709520 14 - TSS region transcription start site region 24682
Tssr24683 2 76709700 to 76709712 12 - TSS region transcription start site region 24683
Tssr24684 2 76709832 to 76709841 9 - TSS region transcription start site region 24684
Tssr24685 2 76709902 to 76709915 13 - TSS region transcription start site region 24685
Tssr24686 2 76710729 to 76710742 13 - TSS region transcription start site region 24686
Tssr24687 2 76711729 to 76711741 12 - TSS region transcription start site region 24687
Tssr24688 2 76712520 to 76712531 11 - TSS region transcription start site region 24688
Tssr24689 2 76712606 to 76712617 11 - TSS region transcription start site region 24689
Tssr24690 2 76713482 to 76713504 22 - TSS region transcription start site region 24690
Tssr24691 2 76713809 to 76713830 21 - TSS region transcription start site region 24691
Tssr24692 2 76713861 to 76713899 38 - TSS region transcription start site region 24692
Tssr24693 2 76715328 to 76715337 9 - TSS region transcription start site region 24693
Tssr24694 2 76715763 to 76715780 17 - TSS region transcription start site region 24694
Tssr24695 2 76718062 to 76718073 11 - TSS region transcription start site region 24695
Tssr24696 2 76718124 to 76718139 15 - TSS region transcription start site region 24696
Tssr24697 2 76718408 to 76718422 14 - TSS region transcription start site region 24697
Tssr24698 2 76718989 to 76719001 12 - TSS region transcription start site region 24698
Tssr24699 2 76719960 to 76719971 11 - TSS region transcription start site region 24699
Tssr24700 2 76720706 to 76720718 12 - TSS region transcription start site region 24700
Gm13938 2 76722776 to 76786708 63932 + antisense lncRNA gene predicted gene 13938
Tssr24701 2 76723321 to 76723334 13 - TSS region transcription start site region 24701
Tssr24702 2 76730166 to 76730185 19 - TSS region transcription start site region 24702
Tssr24703 2 76730455 to 76730464 9 - TSS region transcription start site region 24703
Tssr24704 2 76734794 to 76734819 25 - TSS region transcription start site region 24704
Tssr24705 2 76735258 to 76735266 8 - TSS region transcription start site region 24705
Tssr24706 2 76736142 to 76736154 12 - TSS region transcription start site region 24706
Tssr24707 2 76736200 to 76736217 17 - TSS region transcription start site region 24707
Tssr24708 2 76736858 to 76736872 14 - TSS region transcription start site region 24708
Tssr24709 2 76736999 to 76737014 15 - TSS region transcription start site region 24709
Tssr24710 2 76737247 to 76737258 11 - TSS region transcription start site region 24710
Tssr24711 2 76737459 to 76737471 12 - TSS region transcription start site region 24711
Tssr24712 2 76739089 to 76739103 14 - TSS region transcription start site region 24712
Tssr24713 2 76740811 to 76740823 12 - TSS region transcription start site region 24713
Tssr24714 2 76742255 to 76742266 11 - TSS region transcription start site region 24714
Tssr24715 2 76742279 to 76742295 16 - TSS region transcription start site region 24715
Tssr24716 2 76742736 to 76742752 16 - TSS region transcription start site region 24716
Tssr24717 2 76743768 to 76743780 12 - TSS region transcription start site region 24717
Tssr24718 2 76743816 to 76743824 8 - TSS region transcription start site region 24718
Tssr24719 2 76745117 to 76745134 17 - TSS region transcription start site region 24719
Tssr24720 2 76745586 to 76745598 12 - TSS region transcription start site region 24720
Tssr24721 2 76745626 to 76745640 14 - TSS region transcription start site region 24721
Tssr24722 2 76746082 to 76746102 20 - TSS region transcription start site region 24722
Tssr24723 2 76746406 to 76746419 13 - TSS region transcription start site region 24723
Tssr24724 2 76747063 to 76747074 11 - TSS region transcription start site region 24724
Tssr542 2 76747144 to 76747156 12 - TSS region transcription start site region 542
Tssr24725 2 76748762 to 76748772 10 - TSS region transcription start site region 24725
Tssr24726 2 76748944 to 76748957 13 - TSS region transcription start site region 24726
Tssr24727 2 76750146 to 76750155 9 - TSS region transcription start site region 24727
Tssr24728 2 76750491 to 76750505 14 - TSS region transcription start site region 24728
Tssr24729 2 76750583 to 76750595 12 - TSS region transcription start site region 24729
Tssr24730 2 76752487 to 76752499 12 - TSS region transcription start site region 24730
Tssr24731 2 76753888 to 76753899 11 - TSS region transcription start site region 24731
Tssr24732 2 76754048 to 76754052 4 - TSS region transcription start site region 24732
Tssr24733 2 76755958 to 76755964 6 - TSS region transcription start site region 24733
Tssr24734 2 76760028 to 76760040 12 - TSS region transcription start site region 24734
Tssr24735 2 76760060 to 76760080 20 - TSS region transcription start site region 24735
Tssr24736 2 76764878 to 76764890 12 - TSS region transcription start site region 24736
Tssr24737 2 76766334 to 76766357 23 - TSS region transcription start site region 24737
Tssr24738 2 76766376 to 76766392 16 - TSS region transcription start site region 24738
Tssr24739 2 76768978 to 76768989 11 - TSS region transcription start site region 24739
Tssr24740 2 76770488 to 76770502 14 - TSS region transcription start site region 24740
Tssr24741 2 76770547 to 76770560 13 - TSS region transcription start site region 24741
Tssr24742 2 76778515 to 76778533 18 - TSS region transcription start site region 24742
Tssr24743 2 76781899 to 76781910 11 - TSS region transcription start site region 24743
Tssr24744 2 76784509 to 76784527 18 - TSS region transcription start site region 24744
Tssr24745 2 76785828 to 76785838 10 - TSS region transcription start site region 24745
Tssr24746 2 76786248 to 76786260 12 - TSS region transcription start site region 24746
Tssr24747 2 76786704 to 76786715 11 - TSS region transcription start site region 24747
Tssr24748 2 76787181 to 76787197 16 - TSS region transcription start site region 24748
Tssr24749 2 76789498 to 76789512 14 - TSS region transcription start site region 24749
Tssr24750 2 76790009 to 76790022 13 - TSS region transcription start site region 24750
Tssr24751 2 76791230 to 76791242 12 - TSS region transcription start site region 24751
Tssr24752 2 76791283 to 76791294 11 - TSS region transcription start site region 24752
Tssr24753 2 76794545 to 76794557 12 - TSS region transcription start site region 24753
Tssr24754 2 76796464 to 76796476 12 - TSS region transcription start site region 24754
Tssr24755 2 76798380 to 76798393 13 - TSS region transcription start site region 24755
Tssr24756 2 76798429 to 76798442 13 - TSS region transcription start site region 24756