Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:74859211-75700457

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aips2 2 65119051 to 74881866 9762815 QTL autoimmune pancreatitis severity 2
Hrtfm1 2 67761596 to 75134589 7372993 QTL heart failure modifier 1
Mtx2 2 74825812 to 74876748 50936 + protein coding gene metaxin 2
Gm14427 2 74886372 to 74887006 634 - pseudogene predicted gene 14427
Tssr536 2 74887028 to 74887029 1 - TSS region transcription start site region 536
n-R5s198 2 74935415 to 74935514 99 - rRNA gene nuclear encoded rRNA 5S 198
Gm46748 2 75061610 to 75086930 25320 + lncRNA gene predicted gene, 46748
D2Mit329 2 75065420 to 75065540 120 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 329
D2Mit247 2 75065420 to 75065539 119 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 247
Lfibq18 2 75089647 to 75089647 0 QTL liver fibrosis QTL 18
Tssr24632 2 75119310 to 75119321 11 - TSS region transcription start site region 24632
Gm13652 2 75124871 to 75137798 12927 - lincRNA gene predicted gene 13652
Tssr24633 2 75133672 to 75133681 9 - TSS region transcription start site region 24633
Tssr24634 2 75133708 to 75133722 14 - TSS region transcription start site region 24634
Tssr24635 2 75133754 to 75133767 13 - TSS region transcription start site region 24635
D2Mit418 2 75134416 to 75134589 173 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 418
Cpgi11816 2 75137318 to 75138167 849 CpG island CpG island 11816
Tssr24636 2 75137491 to 75137506 15 - TSS region transcription start site region 24636
2600014E21Rik 2 75138843 to 75317820 178977 + lincRNA gene RIKEN cDNA 2600014E21 gene
Tssr18448 2 75138846 to 75138859 13 + TSS region transcription start site region 18448
Tssr18449 2 75138968 to 75138991 23 + TSS region transcription start site region 18449
A330043C09Rik 2 75147118 to 75177658 30540 - lincRNA gene RIKEN cDNA A330043C09 gene
Rps6-ps4 2 75191073 to 75191822 749 - pseudogene ribosomal protein S6, pseudogene 4
Tssr24637 2 75191854 to 75191855 1 - TSS region transcription start site region 24637
Gm13653 2 75192277 to 75192759 482 + pseudogene predicted gene 13653
Tssr18450 2 75248465 to 75248482 17 + TSS region transcription start site region 18450
Gm34401 2 75274211 to 75285457 11246 - lncRNA gene predicted gene, 34401
Gm18494 2 75302096 to 75303225 1129 - pseudogene predicted gene, 18494
Gm39857 2 75309677 to 75396106 86429 - lncRNA gene predicted gene, 39857
Gm37243 2 75348111 to 75348705 594 - unclassified gene predicted gene, 37243
Gm32927 2 75360072 to 75364889 4817 + lncRNA gene predicted gene, 32927
Gm39856 2 75376098 to 75381346 5248 + lncRNA gene predicted gene, 39856
D2Mit219 2 75416716 to 75416850 134 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 219
Cpgi11817 2 75425027 to 75425227 200 CpG island CpG island 11817
Cpgi11818 2 75434687 to 75435174 487 CpG island CpG island 11818
9430019J16Rik 2 75436057 to 75444179 8122 - lncRNA gene RIKEN cDNA 9430019J16 gene
Gm13658 2 75436057 to 75444179 8122 + lincRNA gene predicted gene 13658
Gm13660 2 75458966 to 75464788 5822 - lincRNA gene predicted gene 13660
Tssr24638 2 75467812 to 75467824 12 - TSS region transcription start site region 24638
Tssr18451 2 75482126 to 75482132 6 + TSS region transcription start site region 18451
Gm39854 2 75508949 to 75515027 6078 + lncRNA gene predicted gene, 39854
D2Dcr136 2 75513277 to 75513379 102 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 136
Tssr18452 2 75582446 to 75582449 3 + TSS region transcription start site region 18452
Cpgi11819 2 75589536 to 75589739 203 CpG island CpG island 11819
Cpgi11820 2 75593541 to 75593840 299 CpG island CpG island 11820
Cpgi11821 2 75609677 to 75610082 405 CpG island CpG island 11821
Gm39853 2 75613386 to 75615353 1967 + lncRNA gene predicted gene, 39853
Gm13655 2 75632638 to 75633382 744 - pseudogene predicted gene 13655
Tssr24639 2 75633532 to 75633543 11 - TSS region transcription start site region 24639
Tssr24640 2 75633544 to 75633557 13 - TSS region transcription start site region 24640
Tssr24641 2 75633580 to 75633594 14 - TSS region transcription start site region 24641
Tssr24642 2 75633852 to 75633863 11 - TSS region transcription start site region 24642
Tssr18453 2 75633973 to 75634005 32 + TSS region transcription start site region 18453
Tssr18454 2 75634011 to 75634042 31 + TSS region transcription start site region 18454
Gm39858 2 75634015 to 75634375 360 + lncRNA gene predicted gene, 39858
Tssr18455 2 75634056 to 75634067 11 + TSS region transcription start site region 18455
Tssr18456 2 75634614 to 75634618 4 + TSS region transcription start site region 18456
Gm39859 2 75651173 to 75659182 8009 - lncRNA gene predicted gene, 39859
Cpgi11822 2 75658575 to 75660080 1505 CpG island CpG island 11822
Tssr24643 2 75658886 to 75658959 73 - TSS region transcription start site region 24643
Tssr18457 2 75659056 to 75659091 35 + TSS region transcription start site region 18457
Tssr18458 2 75659092 to 75659108 16 + TSS region transcription start site region 18458
Gm24574 2 75659244 to 75659317 73 + miRNA gene predicted gene, 24574
Tssr18459 2 75659253 to 75659266 13 + TSS region transcription start site region 18459
Hnrnpa3 2 75659261 to 75669407 10146 + protein coding gene heterogeneous nuclear ribonucleoprotein A3
Tssr24644 2 75659775 to 75659817 42 - TSS region transcription start site region 24644
Nfe2l2 2 75675513 to 75704641 29128 - protein coding gene nuclear factor, erythroid derived 2, like 2
Tssr24645 2 75676238 to 75676272 34 - TSS region transcription start site region 24645
Tssr24646 2 75676390 to 75676402 12 - TSS region transcription start site region 24646
Tssr24647 2 75676528 to 75676553 25 - TSS region transcription start site region 24647
Tssr24648 2 75676633 to 75676650 17 - TSS region transcription start site region 24648
Tssr24649 2 75677578 to 75677593 15 - TSS region transcription start site region 24649
Tssr24650 2 75679392 to 75679405 13 - TSS region transcription start site region 24650
Tssr24651 2 75679411 to 75679432 21 - TSS region transcription start site region 24651
Tssr18460 2 75683199 to 75683211 12 + TSS region transcription start site region 18460
Tssr24652 2 75685504 to 75685523 19 - TSS region transcription start site region 24652
Gm24996 2 75686740 to 75686838 98 - snRNA gene predicted gene, 24996
Tssr24653 2 75690608 to 75690610 2 - TSS region transcription start site region 24653