Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:74705973-74725976

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(2Hoxd8-Hoxd13)9Ddu 2 74668310 to 74707933 39623 chromosomal deletion deletion, Chr 2, Denis Duboule 9
Del(2Hoxd8-Hoxd13)11Ddu 2 74668310 to 74707933 39623 chromosomal deletion deletion, Chr 2, Denis Duboule 11
Del(2Hoxd8-Hoxd10)21Ddu 2 74691924 to 74707933 16009 chromosomal deletion deletion, Chr 2, Denis Duboule 21
Del(2Hoxd8-Hoxd10)15Ddu 2 74691924 to 74707933 16009 chromosomal deletion deletion, Chr 2, Denis Duboule 15
Dp(2Hoxd8-Hoxd10)1Ddu 2 74691924 to 74707933 16009 chromosomal duplication duplication, Chr 2, Denis Duboule 1
Dp(2Hoxd8-Hoxd9)2Ddu 2 74697763 to 74707933 10170 chromosomal duplication duplication, Chr 2, Denis Duboule 2
Del(2Hoxd8-Hoxd9)22Ddu 2 74697763 to 74707933 10170 chromosomal deletion deletion, Chr 2, Denis Duboule 22
Del(2Hoxd8-Hoxd9)18Ddu 2 74697763 to 74707933 10170 chromosomal deletion deletion, Chr 2, Denis Duboule 18
Gm38462 2 74702998 to 74712058 9060 - protein coding gene predicted gene, 38462
Cpgi11800 2 74704006 to 74706238 2232 CpG island CpG island 11800
Hoxd8 2 74704615 to 74707933 3318 + protein coding gene homeobox D8
Tssr18431 2 74709713 to 74709714 1 + TSS region transcription start site region 18431
Hoxd3os1 2 74710044 to 74716130 6086 - antisense lncRNA gene homeobox D3, opposite strand 1
Cpgi11801 2 74711739 to 74712591 852 CpG island CpG island 11801
Tssr18432 2 74711858 to 74711873 15 + TSS region transcription start site region 18432
Tssr18433 2 74711888 to 74711908 20 + TSS region transcription start site region 18433
Tssr18434 2 74711911 to 74711939 28 + TSS region transcription start site region 18434
Tssr18435 2 74711958 to 74712000 42 + TSS region transcription start site region 18435
Hoxd3 2 74711993 to 74748271 36278 + protein coding gene homeobox D3
Tssr18436 2 74712121 to 74712157 36 + TSS region transcription start site region 18436
Tssr24624 2 74714263 to 74714296 33 - TSS region transcription start site region 24624
Cpgi11802 2 74714992 to 74715233 241 CpG island CpG island 11802
Cpgi11803 2 74715846 to 74716219 373 CpG island CpG island 11803
Tssr533 2 74715973 to 74715976 3 - TSS region transcription start site region 533
Tssr24625 2 74715989 to 74716000 11 - TSS region transcription start site region 24625
Tssr534 2 74716002 to 74716007 5 - TSS region transcription start site region 534
Tssr24626 2 74716020 to 74716027 7 - TSS region transcription start site region 24626
Tssr24627 2 74716124 to 74716135 11 - TSS region transcription start site region 24627
Tssr24628 2 74716137 to 74716157 20 - TSS region transcription start site region 24628
Tssr18437 2 74716988 to 74716995 7 + TSS region transcription start site region 18437
Hoxd4 2 74721978 to 74729160 7182 + protein coding gene homeobox D4
Del(2Hoxd1-Hoxd4)56Ddu 2 74721978 to 74765142 43164 chromosomal deletion deletion, Chr 2, Denis Duboule 56
Del(2Hoxd1-Hoxd4)55Ddu 2 74721978 to 74765142 43164 chromosomal deletion deletion, Chr 2, Denis Duboule 55
Tssr18438 2 74722052 to 74722074 22 + TSS region transcription start site region 18438
Cpgi11804 2 74723306 to 74723643 337 CpG island CpG island 11804
Cpgi11805 2 74725320 to 74725624 304 CpG island CpG island 11805