Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:74499076-74664544

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(2Itga6-Evx2)44Ddu 2 71786886 to 74659557 2872671 chromosomal inversion inversion, Chr 2, Denis Duboule 44
In(2Lnp-Itga6)47Ddu 2 71786886 to 74579435 2792549 chromosomal inversion inversion, Chr 2, Denis Duboule 47
Del(2Evx2-Atf2)53Ddu 2 73816509 to 74659557 843048 chromosomal deletion deletion, Chr 2, Denis Duboule 53
Dp(2Lnp-Atf2)60Ddu 2 73816509 to 74579435 762926 chromosomal duplication duplication, Chr 2, Denis Duboule 60
Dp(2Evx2-Atf2)59Ddu 2 73816509 to 74659557 843048 chromosomal duplication duplication, Chr 2, Denis Duboule 59
Tssr24605 2 74518958 to 74518986 28 - TSS region transcription start site region 24605
Lnpk 2 74520291 to 74579435 59144 - protein coding gene lunapark, ER junction formation factor
Tssr24606 2 74521974 to 74521985 11 - TSS region transcription start site region 24606
Tssr24607 2 74544534 to 74544555 21 - TSS region transcription start site region 24607
Tssr24608 2 74562797 to 74562803 6 - TSS region transcription start site region 24608
Tssr24609 2 74576594 to 74576607 13 - TSS region transcription start site region 24609
Cpgi11782 2 74578118 to 74579289 1171 CpG island CpG island 11782
Tssr24610 2 74578875 to 74578954 79 - TSS region transcription start site region 24610
Tssr18388 2 74579039 to 74579048 9 + TSS region transcription start site region 18388
4930445N08Rik 2 74579076 to 74584544 5468 + antisense lncRNA gene RIKEN cDNA 4930445N08 gene
Tssr24611 2 74579407 to 74579417 10 - TSS region transcription start site region 24611
Tssr24612 2 74579420 to 74579450 30 - TSS region transcription start site region 24612
Tssr24613 2 74579461 to 74579464 3 - TSS region transcription start site region 24613
Mrpl23-ps1 2 74591372 to 74591915 543 - pseudogene mitichondrial ribosomal protein L23, pseudogene 1
Tssr24614 2 74591891 to 74591908 17 - TSS region transcription start site region 24614
Gm39852 2 74598145 to 74606232 8087 - lncRNA gene predicted gene, 39852
Tssr24615 2 74602130 to 74602152 22 - TSS region transcription start site region 24615
Tssr24616 2 74606162 to 74606171 9 - TSS region transcription start site region 24616
Gm22975 2 74624642 to 74624748 106 + snRNA gene predicted gene, 22975
Gm13672 2 74631840 to 74632298 458 + pseudogene predicted gene 13672
Evx2 2 74652991 to 74659557 6566 - protein coding gene even-skipped homeobox 2
Cpgi11783 2 74654936 to 74656714 1778 CpG island CpG island 11783
Cpgi11784 2 74657418 to 74658188 770 CpG island CpG island 11784
D2Tfv7 2 74657541 to 74657770 229 DNA segment DNA segment, Chr 2, Thomas F. Vogt 7
Cpgi11785 2 74658543 to 74659769 1226 CpG island CpG island 11785
Tssr24617 2 74659789 to 74659802 13 - TSS region transcription start site region 24617
Tssr24618 2 74659835 to 74659846 11 - TSS region transcription start site region 24618
Tssr24619 2 74659852 to 74659865 13 - TSS region transcription start site region 24619
Cpgi11786 2 74660916 to 74661239 323 CpG island CpG island 11786
Tssr24620 2 74661194 to 74661201 7 - TSS region transcription start site region 24620
Tssr24621 2 74661243 to 74661252 9 - TSS region transcription start site region 24621
Gm31790 2 74661551 to 74666891 5340 + lncRNA gene predicted gene, 31790
Cpgi11787 2 74661774 to 74662033 259 CpG island CpG island 11787