Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:72506192-72976402

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11758 2 72529866 to 72530043 177 CpG island CpG island 11758
Cpgi11759 2 72534256 to 72534634 378 CpG island CpG island 11759
Tssr18355 2 72545182 to 72545186 4 + TSS region transcription start site region 18355
Rps13-ps8 2 72545212 to 72545612 400 + pseudogene ribosmal protein S13, pseudogene 8
Cpgi11760 2 72565838 to 72566213 375 CpG island CpG island 11760
Eif1-ps3 2 72570481 to 72570822 341 - pseudogene eukaryotic translation initiation factor 1, pseudogene 3
Tssr18356 2 72597545 to 72597548 3 + TSS region transcription start site region 18356
Gm30069 2 72603925 to 72615214 11289 - lncRNA gene predicted gene, 30069
Tssr18357 2 72609117 to 72609125 8 + TSS region transcription start site region 18357
Tssr24513 2 72615164 to 72615169 5 - TSS region transcription start site region 24513
D2Mit245 2 72624072 to 72624172 100 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 245
4930550I04Rik 2 72629022 to 72630431 1409 unclassified gene RIKEN cDNA 4930550I04 gene
Tssr24514 2 72630396 to 72630409 13 - TSS region transcription start site region 24514
Pex13-ps 2 72632270 to 72633426 1156 + pseudogene peroxisomal biogenesis factor 13, pseudogene
Cpgi11761 2 72633836 to 72634091 255 CpG island CpG island 11761
Tssr524 2 72633843 to 72633847 4 + TSS region transcription start site region 524
Ak3l2-ps 2 72633936 to 72634607 671 + pseudogene adenylate kinase 3-like 2, pseudogene
Tssr525 2 72634043 to 72634060 17 + TSS region transcription start site region 525
8430437L04Rik 2 72703510 to 72729468 25958 + lincRNA gene RIKEN cDNA 8430437L04 gene
Gm30257 2 72733821 to 72745068 11247 + lncRNA gene predicted gene, 30257
Cpgi11762 2 72741192 to 72741402 210 CpG island CpG island 11762
6430710C18Rik 2 72745846 to 72813717 67871 - lincRNA gene RIKEN cDNA 6430710C18 gene
Gm46747 2 72762194 to 72763211 1017 - lncRNA gene predicted gene, 46747
Gm39848 2 72775982 to 72784958 8976 + lncRNA gene predicted gene, 39848
Tssr24515 2 72813665 to 72813685 20 - TSS region transcription start site region 24515
Tssr18358 2 72828864 to 72828905 41 + TSS region transcription start site region 18358
Gm39849 2 72834404 to 72861777 27373 - lncRNA gene predicted gene, 39849
Tssr24516 2 72886612 to 72886614 2 - TSS region transcription start site region 24516
Tssr526 2 72908564 to 72908601 37 - TSS region transcription start site region 526
Sp3 2 72936430 to 72980446 44016 - protein coding gene trans-acting transcription factor 3
Tssr24517 2 72938056 to 72938081 25 - TSS region transcription start site region 24517
Tssr24518 2 72948194 to 72948199 5 - TSS region transcription start site region 24518
Gm25960 2 72950863 to 72950987 124 - miRNA gene predicted gene, 25960
Tssr24519 2 72953031 to 72953053 22 - TSS region transcription start site region 24519
Tssr24520 2 72955775 to 72955781 6 - TSS region transcription start site region 24520
Hspe1-ps5 2 72955898 to 72956194 296 + pseudogene heat shock protein 1 (chaperonin 10), pseudogene 5
Tssr24521 2 72963797 to 72963826 29 - TSS region transcription start site region 24521
Tssr527 2 72970636 to 72970644 8 + TSS region transcription start site region 527
Tssr24522 2 72971374 to 72971386 12 - TSS region transcription start site region 24522
Gm11084 2 72971548 to 72986716 15168 - protein coding gene predicted gene 11084