Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:71782551-71952584

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11750 2 71786525 to 71787960 1435 CpG island CpG island 11750
Itga6 2 71786886 to 71858427 71541 + protein coding gene integrin alpha 6
In(2Atf2-Itga6)58Ddu 2 71786886 to 73892639 2105753 chromosomal inversion inversion, Chr 2, Denis Duboule 58
In(2Hoxd11;Itga6)1Ddu 2 71786886 to 74687016 2900130 chromosomal inversion inversion, Chr 2, Denis Duboule 1
In(2Itga6-Evx2)44Ddu 2 71786886 to 74659557 2872671 chromosomal inversion inversion, Chr 2, Denis Duboule 44
In(2Lnp-Itga6)47Ddu 2 71786886 to 74579435 2792549 chromosomal inversion inversion, Chr 2, Denis Duboule 47
Tssr18284 2 71786898 to 71786908 10 + TSS region transcription start site region 18284
Tssr18285 2 71786923 to 71786945 22 + TSS region transcription start site region 18285
Tssr18286 2 71787014 to 71787045 31 + TSS region transcription start site region 18286
Tssr18287 2 71787057 to 71787083 26 + TSS region transcription start site region 18287
Tssr18288 2 71787098 to 71787107 9 + TSS region transcription start site region 18288
Tssr18289 2 71787115 to 71787133 18 + TSS region transcription start site region 18289
Tssr519 2 71787827 to 71787829 2 - TSS region transcription start site region 519
Tssr18290 2 71805973 to 71805985 12 + TSS region transcription start site region 18290
Tssr24498 2 71810183 to 71810189 6 - TSS region transcription start site region 24498
Tssr18291 2 71814246 to 71814256 10 + TSS region transcription start site region 18291
Tssr18292 2 71866127 to 71866132 5 + TSS region transcription start site region 18292
Tssr24499 2 71867551 to 71867584 33 - TSS region transcription start site region 24499
Tssr18293 2 71867754 to 71867759 5 + TSS region transcription start site region 18293
Tssr24500 2 71868306 to 71868326 20 - TSS region transcription start site region 24500
Tssr18294 2 71868507 to 71868513 6 + TSS region transcription start site region 18294
Tssr18295 2 71868514 to 71868526 12 + TSS region transcription start site region 18295
Cpgi11751 2 71872769 to 71874074 1305 CpG island CpG island 11751
Tssr24501 2 71873050 to 71873092 42 - TSS region transcription start site region 24501
Pdk1 2 71873224 to 71903858 30634 + protein coding gene pyruvate dehydrogenase kinase, isoenzyme 1
Tssr18296 2 71873258 to 71873263 5 + TSS region transcription start site region 18296
Tssr18297 2 71873266 to 71873272 6 + TSS region transcription start site region 18297
Tssr18298 2 71873278 to 71873326 48 + TSS region transcription start site region 18298
Tssr520 2 71873345 to 71873346 1 + TSS region transcription start site region 520
Tssr18299 2 71873346 to 71873349 3 + TSS region transcription start site region 18299
Tssr18300 2 71873365 to 71873374 9 + TSS region transcription start site region 18300
Tssr18301 2 71875081 to 71875090 9 + TSS region transcription start site region 18301
Gm46785 2 71937836 to 71942033 4197 + lncRNA gene predicted gene, 46785