Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eae33 | 2 | 35677401 | QTL | experimental allergic encephalomyelitis susceptibility 33 | ||
D2Mit11 | 2 | 224 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 11 | ||
Cpgi11750 | 2 | 1435 | CpG island | CpG island 11750 | ||
Itga6 | 2 | 71541 | + | protein coding gene | integrin alpha 6 | |
In(2Itga6-Evx2)44Ddu | 2 | 2872671 | chromosomal inversion | inversion, Chr 2, Denis Duboule 44 | ||
In(2Lnp-Itga6)47Ddu | 2 | 2792549 | chromosomal inversion | inversion, Chr 2, Denis Duboule 47 | ||
In(2Atf2-Itga6)58Ddu | 2 | 2105753 | chromosomal inversion | inversion, Chr 2, Denis Duboule 58 | ||
In(2Hoxd11;Itga6)1Ddu | 2 | 2900130 | chromosomal inversion | inversion, Chr 2, Denis Duboule 1 | ||
Tssr18284 | 2 | 10 | + | TSS region | transcription start site region 18284 | |
Tssr18285 | 2 | 22 | + | TSS region | transcription start site region 18285 | |
Tssr18286 | 2 | 31 | + | TSS region | transcription start site region 18286 | |
Tssr18287 | 2 | 26 | + | TSS region | transcription start site region 18287 | |
Tssr18288 | 2 | 9 | + | TSS region | transcription start site region 18288 | |
Tssr18289 | 2 | 18 | + | TSS region | transcription start site region 18289 | |
Tssr519 | 2 | 2 | - | TSS region | transcription start site region 519 | |
Tssr18290 | 2 | 12 | + | TSS region | transcription start site region 18290 | |
Tssr24498 | 2 | 6 | - | TSS region | transcription start site region 24498 | |
Tssr18291 | 2 | 10 | + | TSS region | transcription start site region 18291 | |
Tssr18292 | 2 | 5 | + | TSS region | transcription start site region 18292 | |
Tssr24499 | 2 | 33 | - | TSS region | transcription start site region 24499 | |
Tssr18293 | 2 | 5 | + | TSS region | transcription start site region 18293 | |
Tssr24500 | 2 | 20 | - | TSS region | transcription start site region 24500 | |
Tssr18294 | 2 | 6 | + | TSS region | transcription start site region 18294 | |
Tssr18295 | 2 | 12 | + | TSS region | transcription start site region 18295 | |
Cpgi11751 | 2 | 1305 | CpG island | CpG island 11751 | ||
Tssr24501 | 2 | 42 | - | TSS region | transcription start site region 24501 | |
Pdk1 | 2 | 30634 | + | protein coding gene | pyruvate dehydrogenase kinase, isoenzyme 1 | |
Tssr18296 | 2 | 5 | + | TSS region | transcription start site region 18296 | |
Tssr18297 | 2 | 6 | + | TSS region | transcription start site region 18297 | |
Tssr18298 | 2 | 48 | + | TSS region | transcription start site region 18298 | |
Tssr520 | 2 | 1 | + | TSS region | transcription start site region 520 | |
Tssr18299 | 2 | 3 | + | TSS region | transcription start site region 18299 | |
Tssr18300 | 2 | 9 | + | TSS region | transcription start site region 18300 | |
Tssr18301 | 2 | 9 | + | TSS region | transcription start site region 18301 | |
Gm46785 | 2 | 4197 | + | lncRNA gene | predicted gene, 46785 | |
Gm13746 | 2 | 1315 | + | lincRNA gene | predicted gene 13746 | |
Gm39845 | 2 | 11177 | + | lncRNA gene | predicted gene, 39845 | |
D2Mit328 | 2 | 234 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 328 | ||
Cpgi11752 | 2 | 1004 | CpG island | CpG island 11752 | ||
Tssr18302 | 2 | 9 | + | TSS region | transcription start site region 18302 | |
Tssr521 | 2 | 17 | + | TSS region | transcription start site region 521 | |
Tssr18303 | 2 | 11 | + | TSS region | transcription start site region 18303 | |
Tssr18304 | 2 | 101 | + | TSS region | transcription start site region 18304 | |
Rapgef4 | 2 | 276234 | + | protein coding gene | Rap guanine nucleotide exchange factor (GEF) 4 | |
Gm26408 | 2 | 126 | - | snoRNA gene | predicted gene, 26408 | |
Tssr18305 | 2 | 4 | + | TSS region | transcription start site region 18305 | |
Rapgef4it | 2 | 967 | unclassified gene | Rap guanine nucleotide exchange factor (GEF) 4, intronic transcript | ||
Cpgi11753 | 2 | 241 | CpG island | CpG island 11753 | ||
Cpgi11754 | 2 | 182 | CpG island | CpG island 11754 | ||
Gm29940 | 2 | 867 | - | lncRNA gene | predicted gene, 29940 | |
Tssr18306 | 2 | 12 | + | TSS region | transcription start site region 18306 | |
Tssr18307 | 2 | 42 | + | TSS region | transcription start site region 18307 | |
Tssr18308 | 2 | 21 | + | TSS region | transcription start site region 18308 | |
Tssr24502 | 2 | 5 | - | TSS region | transcription start site region 24502 | |
Tssr18309 | 2 | 32 | + | TSS region | transcription start site region 18309 | |
Tssr18310 | 2 | 23 | + | TSS region | transcription start site region 18310 | |
Tssr24503 | 2 | 8 | - | TSS region | transcription start site region 24503 | |
Rapgef4os1 | 2 | 51193 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 1 | |
Tssr18311 | 2 | 1 | + | TSS region | transcription start site region 18311 | |
Tssr18312 | 2 | 18 | + | TSS region | transcription start site region 18312 | |
Tssr18313 | 2 | 14 | + | TSS region | transcription start site region 18313 | |
Tssr18314 | 2 | 25 | + | TSS region | transcription start site region 18314 | |
Tssr18315 | 2 | 23 | + | TSS region | transcription start site region 18315 | |
Rapgef4os2 | 2 | 7531 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 2 | |
Tssr18316 | 2 | 5 | + | TSS region | transcription start site region 18316 | |
Tssr24504 | 2 | 15 | - | TSS region | transcription start site region 24504 | |
Tssr18317 | 2 | 3 | + | TSS region | transcription start site region 18317 | |
Tssr18318 | 2 | 14 | + | TSS region | transcription start site region 18318 | |
Tssr18319 | 2 | 24 | + | TSS region | transcription start site region 18319 | |
Tssr18320 | 2 | 62 | + | TSS region | transcription start site region 18320 | |
Tssr18321 | 2 | 14 | + | TSS region | transcription start site region 18321 | |
Tssr18322 | 2 | 6 | + | TSS region | transcription start site region 18322 | |
Tssr18323 | 2 | 18 | + | TSS region | transcription start site region 18323 | |
Tssr18324 | 2 | 1 | + | TSS region | transcription start site region 18324 | |
Tssr18325 | 2 | 11 | + | TSS region | transcription start site region 18325 | |
Tssr18326 | 2 | 9 | + | TSS region | transcription start site region 18326 | |
Tssr18327 | 2 | 24 | + | TSS region | transcription start site region 18327 | |
Tssr24505 | 2 | 12 | - | TSS region | transcription start site region 24505 | |
Rapgef4os3 | 2 | 4010 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 3 | |
Cpgi11755 | 2 | 1009 | CpG island | CpG island 11755 | ||
Map3k20 | 2 | 156973 | + | protein coding gene | mitogen-activated protein kinase kinase kinase 20 | |
Tssr18328 | 2 | 45 | + | TSS region | transcription start site region 18328 | |
Tssr18329 | 2 | 32 | + | TSS region | transcription start site region 18329 | |
Tssr18330 | 2 | 11 | + | TSS region | transcription start site region 18330 | |
Tssr18331 | 2 | 11 | + | TSS region | transcription start site region 18331 | |
Tssr18332 | 2 | 30 | + | TSS region | transcription start site region 18332 | |
Tssr18333 | 2 | 25 | + | TSS region | transcription start site region 18333 | |
Tssr18334 | 2 | 11 | + | TSS region | transcription start site region 18334 | |
Tssr18335 | 2 | 17 | + | TSS region | transcription start site region 18335 | |
Tssr18336 | 2 | 26 | + | TSS region | transcription start site region 18336 | |
Zakit | 2 | 307 | + | unclassified non-coding RNA gene | sterile alpha motif and leucine zipper containing kinase AZK, intronic transcript | |
Tssr24506 | 2 | 6 | - | TSS region | transcription start site region 24506 | |
Rpl36a-ps4 | 2 | 295 | + | pseudogene | ribosomal protein L36A, pseudogene 4 | |
Tssr18337 | 2 | 4 | + | TSS region | transcription start site region 18337 | |
Tssr18338 | 2 | 4 | + | TSS region | transcription start site region 18338 | |
Tssr18339 | 2 | 20 | + | TSS region | transcription start site region 18339 | |
Tssr18340 | 2 | 14 | + | TSS region | transcription start site region 18340 | |
Tssr18341 | 2 | 16 | + | TSS region | transcription start site region 18341 | |
Tssr24507 | 2 | 2 | - | TSS region | transcription start site region 24507 | |
Tssr18342 | 2 | 12 | + | TSS region | transcription start site region 18342 | |
Tssr18343 | 2 | 9 | + | TSS region | transcription start site region 18343 | |
Tssr18344 | 2 | 14 | + | TSS region | transcription start site region 18344 | |
Tssr18345 | 2 | 4 | + | TSS region | transcription start site region 18345 | |
Tssr18346 | 2 | 5 | + | TSS region | transcription start site region 18346 | |
Tssr24508 | 2 | 12 | - | TSS region | transcription start site region 24508 | |
Tssr24509 | 2 | 10 | - | TSS region | transcription start site region 24509 | |
Tssr24510 | 2 | 18 | - | TSS region | transcription start site region 24510 | |
Tssr18347 | 2 | 14 | + | TSS region | transcription start site region 18347 | |
Tssr18348 | 2 | 14 | + | TSS region | transcription start site region 18348 | |
Tssr18349 | 2 | 8 | + | TSS region | transcription start site region 18349 | |
Tssr18350 | 2 | 19 | + | TSS region | transcription start site region 18350 | |
Tssr24511 | 2 | 27 | - | TSS region | transcription start site region 24511 | |
Tssr24512 | 2 | 10 | - | TSS region | transcription start site region 24512 | |
Gm39847 | 2 | 7187 | - | lncRNA gene | predicted gene, 39847 | |
Cpgi11756 | 2 | 1318 | CpG island | CpG island 11756 | ||
Tssr18351 | 2 | 4 | + | TSS region | transcription start site region 18351 | |
Tssr18352 | 2 | 39 | + | TSS region | transcription start site region 18352 | |
Cdca7 | 2 | 10692 | + | protein coding gene | cell division cycle associated 7 | |
Tssr18353 | 2 | 11 | + | TSS region | transcription start site region 18353 | |
Tssr18354 | 2 | 34 | + | TSS region | transcription start site region 18354 | |
Tssr522 | 2 | 16 | + | TSS region | transcription start site region 522 | |
Tssr523 | 2 | 3 | + | TSS region | transcription start site region 523 | |
Cpgi11757 | 2 | 242 | CpG island | CpG island 11757 | ||
Cpgi11758 | 2 | 177 | CpG island | CpG island 11758 | ||
Cpgi11759 | 2 | 378 | CpG island | CpG island 11759 | ||
Tssr18355 | 2 | 4 | + | TSS region | transcription start site region 18355 | |
Rps13-ps8 | 2 | 400 | + | pseudogene | ribosmal protein S13, pseudogene 8 | |
Cpgi11760 | 2 | 375 | CpG island | CpG island 11760 | ||
Eif1-ps3 | 2 | 341 | - | pseudogene | eukaryotic translation initiation factor 1, pseudogene 3 | |
Tssr18356 | 2 | 3 | + | TSS region | transcription start site region 18356 | |
Gm30069 | 2 | 11289 | - | lncRNA gene | predicted gene, 30069 | |
Tssr18357 | 2 | 8 | + | TSS region | transcription start site region 18357 | |
Tssr24513 | 2 | 5 | - | TSS region | transcription start site region 24513 | |
D2Mit245 | 2 | 100 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 245 | ||
4930550I04Rik | 2 | 1409 | unclassified gene | RIKEN cDNA 4930550I04 gene | ||
Tssr24514 | 2 | 13 | - | TSS region | transcription start site region 24514 | |
Pex13-ps | 2 | 1156 | + | pseudogene | peroxisomal biogenesis factor 13, pseudogene | |
Cpgi11761 | 2 | 255 | CpG island | CpG island 11761 | ||
Tssr524 | 2 | 4 | + | TSS region | transcription start site region 524 | |
Ak3l2-ps | 2 | 671 | + | pseudogene | adenylate kinase 3-like 2, pseudogene | |
Tssr525 | 2 | 17 | + | TSS region | transcription start site region 525 | |
8430437L04Rik | 2 | 25958 | + | lincRNA gene | RIKEN cDNA 8430437L04 gene | |
Gm30257 | 2 | 11247 | + | lncRNA gene | predicted gene, 30257 | |
Cpgi11762 | 2 | 210 | CpG island | CpG island 11762 | ||
6430710C18Rik | 2 | 67871 | - | lincRNA gene | RIKEN cDNA 6430710C18 gene | |
Gm46747 | 2 | 1017 | - | lncRNA gene | predicted gene, 46747 | |
Gm39848 | 2 | 8976 | + | lncRNA gene | predicted gene, 39848 |