Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eae33 | 2 | 35677401 | QTL | experimental allergic encephalomyelitis susceptibility 33 | ||
Hat1 | 2 | 52362 | + | protein coding gene | histone aminotransferase 1 | |
Gm23166 | 2 | 100 | - | snRNA gene | predicted gene, 23166 | |
Cpgi11740 | 2 | 763 | CpG island | CpG island 11740 | ||
Metap1d | 2 | 71915 | + | protein coding gene | methionyl aminopeptidase type 1D (mitochondrial) | |
Tssr18265 | 2 | 47 | + | TSS region | transcription start site region 18265 | |
Gm23253 | 2 | 103 | + | snRNA gene | predicted gene, 23253 | |
Tssr18266 | 2 | 19 | + | TSS region | transcription start site region 18266 | |
Tssr24482 | 2 | 4 | - | TSS region | transcription start site region 24482 | |
Gm46746 | 2 | 1334 | - | lncRNA gene | predicted gene, 46746 | |
A130022F02Rik | 2 | 4131 | unclassified gene | RIKEN cDNA A130022F02 gene | ||
Cpgi11741 | 2 | 327 | CpG island | CpG island 11741 | ||
Dlx1 | 2 | 5868 | + | protein coding gene | distal-less homeobox 1 | |
Cpgi11742 | 2 | 2282 | CpG island | CpG island 11742 | ||
Tssr18267 | 2 | 13 | + | TSS region | transcription start site region 18267 | |
Tssr18268 | 2 | 9 | + | TSS region | transcription start site region 18268 | |
Tssr18269 | 2 | 42 | + | TSS region | transcription start site region 18269 | |
Tssr18270 | 2 | 11 | + | TSS region | transcription start site region 18270 | |
Tssr18271 | 2 | 6 | + | TSS region | transcription start site region 18271 | |
Tssr18272 | 2 | 25 | + | TSS region | transcription start site region 18272 | |
Tssr18273 | 2 | 16 | + | TSS region | transcription start site region 18273 | |
Tssr18274 | 2 | 12 | + | TSS region | transcription start site region 18274 | |
Tssr24483 | 2 | 13 | - | TSS region | transcription start site region 24483 | |
Tssr18275 | 2 | 9 | + | TSS region | transcription start site region 18275 | |
Tssr18276 | 2 | 27 | + | TSS region | transcription start site region 18276 | |
Tssr18277 | 2 | 3 | + | TSS region | transcription start site region 18277 | |
Tssr18278 | 2 | 14 | + | TSS region | transcription start site region 18278 | |
Tssr518 | 2 | 5 | + | TSS region | transcription start site region 518 | |
Tssr24484 | 2 | 11 | - | TSS region | transcription start site region 24484 | |
Dlx1as | 2 | 7253 | - | antisense lncRNA gene | distal-less homeobox 1, antisense | |
Tssr18279 | 2 | 27 | + | TSS region | transcription start site region 18279 | |
Tssr18280 | 2 | 21 | + | TSS region | transcription start site region 18280 | |
Cpgi11743 | 2 | 789 | CpG island | CpG island 11743 | ||
Tssr24485 | 2 | 3 | - | TSS region | transcription start site region 24485 | |
Tssr24486 | 2 | 16 | - | TSS region | transcription start site region 24486 | |
Cpgi11744 | 2 | 673 | CpG island | CpG island 11744 | ||
Cpgi11745 | 2 | 521 | CpG island | CpG island 11745 | ||
Dlx2 | 2 | 3346 | - | protein coding gene | distal-less homeobox 2 | |
Tssr24487 | 2 | 5 | - | TSS region | transcription start site region 24487 | |
Cpgi11746 | 2 | 2908 | CpG island | CpG island 11746 | ||
Tssr24488 | 2 | 12 | - | TSS region | transcription start site region 24488 | |
Tssr24489 | 2 | 23 | - | TSS region | transcription start site region 24489 | |
Tssr24490 | 2 | 31 | - | TSS region | transcription start site region 24490 | |
Tssr24491 | 2 | 68 | - | TSS region | transcription start site region 24491 | |
Tssr24492 | 2 | 14 | - | TSS region | transcription start site region 24492 | |
Tssr24493 | 2 | 13 | - | TSS region | transcription start site region 24493 | |
Cpgi11747 | 2 | 162 | CpG island | CpG island 11747 | ||
D2Mit92 | 2 | 148 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 92 | ||
Cpgi11748 | 2 | 507 | CpG island | CpG island 11748 | ||
Gm36857 | 2 | 14421 | + | lncRNA gene | predicted gene, 36857 | |
Cpgi11749 | 2 | 823 | CpG island | CpG island 11749 | ||
Tssr18281 | 2 | 20 | + | TSS region | transcription start site region 18281 | |
Gm36909 | 2 | 2118 | + | lncRNA gene | predicted gene, 36909 | |
Tssr24494 | 2 | 49 | - | TSS region | transcription start site region 24494 | |
Tssr18282 | 2 | 8 | + | TSS region | transcription start site region 18282 | |
Platr26 | 2 | 11549 | + | lincRNA gene | pluripotency associated transcript 26 | |
Gm13647 | 2 | 7582 | + | lincRNA gene | predicted gene 13647 | |
Tssr24495 | 2 | 32 | - | TSS region | transcription start site region 24495 | |
Tssr18283 | 2 | 37 | + | TSS region | transcription start site region 18283 | |
Gm13663 | 2 | 2693 | + | unclassified non-coding RNA gene | predicted gene 13663 | |
Gm17250 | 2 | 2087 | - | lincRNA gene | predicted gene, 17250 | |
Gm13662 | 2 | 9876 | + | unclassified non-coding RNA gene | predicted gene 13662 | |
Tssr24496 | 2 | 12 | - | TSS region | transcription start site region 24496 | |
Tssr24497 | 2 | 15 | - | TSS region | transcription start site region 24497 | |
Gm13739 | 2 | 529 | - | pseudogene | predicted gene 13739 | |
D2Mit11 | 2 | 224 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 11 | ||
Cpgi11750 | 2 | 1435 | CpG island | CpG island 11750 | ||
Itga6 | 2 | 71541 | + | protein coding gene | integrin alpha 6 | |
In(2Itga6-Evx2)44Ddu | 2 | 2872671 | chromosomal inversion | inversion, Chr 2, Denis Duboule 44 | ||
In(2Atf2-Itga6)58Ddu | 2 | 2105753 | chromosomal inversion | inversion, Chr 2, Denis Duboule 58 | ||
In(2Hoxd11;Itga6)1Ddu | 2 | 2900130 | chromosomal inversion | inversion, Chr 2, Denis Duboule 1 | ||
In(2Lnp-Itga6)47Ddu | 2 | 2792549 | chromosomal inversion | inversion, Chr 2, Denis Duboule 47 | ||
Tssr18284 | 2 | 10 | + | TSS region | transcription start site region 18284 | |
Tssr18285 | 2 | 22 | + | TSS region | transcription start site region 18285 | |
Tssr18286 | 2 | 31 | + | TSS region | transcription start site region 18286 | |
Tssr18287 | 2 | 26 | + | TSS region | transcription start site region 18287 | |
Tssr18288 | 2 | 9 | + | TSS region | transcription start site region 18288 | |
Tssr18289 | 2 | 18 | + | TSS region | transcription start site region 18289 | |
Tssr519 | 2 | 2 | - | TSS region | transcription start site region 519 | |
Tssr18290 | 2 | 12 | + | TSS region | transcription start site region 18290 | |
Tssr24498 | 2 | 6 | - | TSS region | transcription start site region 24498 | |
Tssr18291 | 2 | 10 | + | TSS region | transcription start site region 18291 | |
Tssr18292 | 2 | 5 | + | TSS region | transcription start site region 18292 | |
Tssr24499 | 2 | 33 | - | TSS region | transcription start site region 24499 | |
Tssr18293 | 2 | 5 | + | TSS region | transcription start site region 18293 | |
Tssr24500 | 2 | 20 | - | TSS region | transcription start site region 24500 | |
Tssr18294 | 2 | 6 | + | TSS region | transcription start site region 18294 | |
Tssr18295 | 2 | 12 | + | TSS region | transcription start site region 18295 | |
Cpgi11751 | 2 | 1305 | CpG island | CpG island 11751 | ||
Tssr24501 | 2 | 42 | - | TSS region | transcription start site region 24501 | |
Pdk1 | 2 | 30634 | + | protein coding gene | pyruvate dehydrogenase kinase, isoenzyme 1 | |
Tssr18296 | 2 | 5 | + | TSS region | transcription start site region 18296 | |
Tssr18297 | 2 | 6 | + | TSS region | transcription start site region 18297 | |
Tssr18298 | 2 | 48 | + | TSS region | transcription start site region 18298 | |
Tssr520 | 2 | 1 | + | TSS region | transcription start site region 520 | |
Tssr18299 | 2 | 3 | + | TSS region | transcription start site region 18299 | |
Tssr18300 | 2 | 9 | + | TSS region | transcription start site region 18300 | |
Tssr18301 | 2 | 9 | + | TSS region | transcription start site region 18301 | |
Gm46785 | 2 | 4197 | + | lncRNA gene | predicted gene, 46785 | |
Gm13746 | 2 | 1315 | + | lincRNA gene | predicted gene 13746 | |
Gm39845 | 2 | 11177 | + | lncRNA gene | predicted gene, 39845 | |
D2Mit328 | 2 | 234 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 328 | ||
Cpgi11752 | 2 | 1004 | CpG island | CpG island 11752 | ||
Tssr18302 | 2 | 9 | + | TSS region | transcription start site region 18302 | |
Tssr521 | 2 | 17 | + | TSS region | transcription start site region 521 | |
Tssr18303 | 2 | 11 | + | TSS region | transcription start site region 18303 | |
Tssr18304 | 2 | 101 | + | TSS region | transcription start site region 18304 | |
Rapgef4 | 2 | 276234 | + | protein coding gene | Rap guanine nucleotide exchange factor (GEF) 4 | |
Gm26408 | 2 | 126 | - | snoRNA gene | predicted gene, 26408 | |
Tssr18305 | 2 | 4 | + | TSS region | transcription start site region 18305 | |
Rapgef4it | 2 | 967 | unclassified gene | Rap guanine nucleotide exchange factor (GEF) 4, intronic transcript | ||
Cpgi11753 | 2 | 241 | CpG island | CpG island 11753 | ||
Cpgi11754 | 2 | 182 | CpG island | CpG island 11754 | ||
Gm29940 | 2 | 867 | - | lncRNA gene | predicted gene, 29940 | |
Tssr18306 | 2 | 12 | + | TSS region | transcription start site region 18306 | |
Tssr18307 | 2 | 42 | + | TSS region | transcription start site region 18307 | |
Tssr18308 | 2 | 21 | + | TSS region | transcription start site region 18308 | |
Tssr24502 | 2 | 5 | - | TSS region | transcription start site region 24502 | |
Tssr18309 | 2 | 32 | + | TSS region | transcription start site region 18309 | |
Tssr18310 | 2 | 23 | + | TSS region | transcription start site region 18310 | |
Tssr24503 | 2 | 8 | - | TSS region | transcription start site region 24503 | |
Rapgef4os1 | 2 | 51193 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 1 | |
Tssr18311 | 2 | 1 | + | TSS region | transcription start site region 18311 | |
Tssr18312 | 2 | 18 | + | TSS region | transcription start site region 18312 | |
Tssr18313 | 2 | 14 | + | TSS region | transcription start site region 18313 | |
Tssr18314 | 2 | 25 | + | TSS region | transcription start site region 18314 | |
Tssr18315 | 2 | 23 | + | TSS region | transcription start site region 18315 | |
Rapgef4os2 | 2 | 7531 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 2 | |
Tssr18316 | 2 | 5 | + | TSS region | transcription start site region 18316 | |
Tssr24504 | 2 | 15 | - | TSS region | transcription start site region 24504 | |
Tssr18317 | 2 | 3 | + | TSS region | transcription start site region 18317 | |
Tssr18318 | 2 | 14 | + | TSS region | transcription start site region 18318 | |
Tssr18319 | 2 | 24 | + | TSS region | transcription start site region 18319 | |
Tssr18320 | 2 | 62 | + | TSS region | transcription start site region 18320 | |
Tssr18321 | 2 | 14 | + | TSS region | transcription start site region 18321 | |
Tssr18322 | 2 | 6 | + | TSS region | transcription start site region 18322 | |
Tssr18323 | 2 | 18 | + | TSS region | transcription start site region 18323 | |
Tssr18324 | 2 | 1 | + | TSS region | transcription start site region 18324 | |
Tssr18325 | 2 | 11 | + | TSS region | transcription start site region 18325 | |
Tssr18326 | 2 | 9 | + | TSS region | transcription start site region 18326 | |
Tssr18327 | 2 | 24 | + | TSS region | transcription start site region 18327 | |
Tssr24505 | 2 | 12 | - | TSS region | transcription start site region 24505 | |
Rapgef4os3 | 2 | 4010 | - | antisense lncRNA gene | Rap guanine nucleotide exchange factor (GEF) 4, opposite strand 3 | |
Cpgi11755 | 2 | 1009 | CpG island | CpG island 11755 | ||
Map3k20 | 2 | 156973 | + | protein coding gene | mitogen-activated protein kinase kinase kinase 20 | |
Tssr18328 | 2 | 45 | + | TSS region | transcription start site region 18328 | |
Tssr18329 | 2 | 32 | + | TSS region | transcription start site region 18329 | |
Tssr18330 | 2 | 11 | + | TSS region | transcription start site region 18330 | |
Tssr18331 | 2 | 11 | + | TSS region | transcription start site region 18331 |