Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:71414548-71644564

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hat1 2 71389260 to 71441622 52362 + protein coding gene histone aminotransferase 1
Tssr18262 2 71421229 to 71421242 13 + TSS region transcription start site region 18262
Tssr18263 2 71421662 to 71421682 20 + TSS region transcription start site region 18263
Tssr18264 2 71437100 to 71437146 46 + TSS region transcription start site region 18264
Gm23166 2 71450514 to 71450614 100 - snRNA gene predicted gene, 23166
Cpgi11740 2 71453058 to 71453821 763 CpG island CpG island 11740
Metap1d 2 71453281 to 71525196 71915 + protein coding gene methionyl aminopeptidase type 1D (mitochondrial)
Tssr18265 2 71453323 to 71453370 47 + TSS region transcription start site region 18265
Gm23253 2 71495271 to 71495374 103 + snRNA gene predicted gene, 23253
Tssr18266 2 71499584 to 71499603 19 + TSS region transcription start site region 18266
Tssr24482 2 71511285 to 71511289 4 - TSS region transcription start site region 24482
Gm46746 2 71514349 to 71515683 1334 - lncRNA gene predicted gene, 46746
A130022F02Rik 2 71517895 to 71522026 4131 unclassified gene RIKEN cDNA A130022F02 gene
Cpgi11741 2 71527393 to 71527720 327 CpG island CpG island 11741
Dlx1 2 71528113 to 71533981 5868 + protein coding gene distal-less homeobox 1
Cpgi11742 2 71528375 to 71530657 2282 CpG island CpG island 11742
Tssr18267 2 71528517 to 71528530 13 + TSS region transcription start site region 18267
Tssr18268 2 71528538 to 71528547 9 + TSS region transcription start site region 18268
Tssr18269 2 71528603 to 71528645 42 + TSS region transcription start site region 18269
Tssr18270 2 71528657 to 71528668 11 + TSS region transcription start site region 18270
Tssr18271 2 71529078 to 71529084 6 + TSS region transcription start site region 18271
Tssr18272 2 71529085 to 71529110 25 + TSS region transcription start site region 18272
Tssr18273 2 71529548 to 71529564 16 + TSS region transcription start site region 18273
Tssr18274 2 71529589 to 71529601 12 + TSS region transcription start site region 18274
Tssr24483 2 71529655 to 71529668 13 - TSS region transcription start site region 24483
Tssr18275 2 71529798 to 71529807 9 + TSS region transcription start site region 18275
Tssr18276 2 71529814 to 71529841 27 + TSS region transcription start site region 18276
Tssr18277 2 71529900 to 71529903 3 + TSS region transcription start site region 18277
Tssr18278 2 71529922 to 71529936 14 + TSS region transcription start site region 18278
Tssr518 2 71529968 to 71529973 5 + TSS region transcription start site region 518
Tssr24484 2 71530590 to 71530601 11 - TSS region transcription start site region 24484
Dlx1as 2 71530638 to 71537891 7253 - antisense lncRNA gene distal-less homeobox 1, antisense
Tssr18279 2 71530729 to 71530756 27 + TSS region transcription start site region 18279
Tssr18280 2 71530758 to 71530779 21 + TSS region transcription start site region 18280
Cpgi11743 2 71532181 to 71532970 789 CpG island CpG island 11743
Tssr24485 2 71537678 to 71537681 3 - TSS region transcription start site region 24485
Tssr24486 2 71537891 to 71537907 16 - TSS region transcription start site region 24486
Cpgi11744 2 71541024 to 71541697 673 CpG island CpG island 11744
Cpgi11745 2 71542896 to 71543417 521 CpG island CpG island 11745
Dlx2 2 71543408 to 71546754 3346 - protein coding gene distal-less homeobox 2
Tssr24487 2 71543873 to 71543878 5 - TSS region transcription start site region 24487
Cpgi11746 2 71544114 to 71547022 2908 CpG island CpG island 11746
Tssr24488 2 71546136 to 71546148 12 - TSS region transcription start site region 24488
Tssr24489 2 71546344 to 71546367 23 - TSS region transcription start site region 24489
Tssr24490 2 71546368 to 71546399 31 - TSS region transcription start site region 24490
Tssr24491 2 71546401 to 71546469 68 - TSS region transcription start site region 24491
Tssr24492 2 71546484 to 71546498 14 - TSS region transcription start site region 24492
Tssr24493 2 71546745 to 71546758 13 - TSS region transcription start site region 24493
Cpgi11747 2 71551903 to 71552065 162 CpG island CpG island 11747
D2Mit92 2 71579653 to 71579801 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 92
Cpgi11748 2 71580991 to 71581498 507 CpG island CpG island 11748
Gm36857 2 71591329 to 71605750 14421 + lncRNA gene predicted gene, 36857
Cpgi11749 2 71629249 to 71630072 823 CpG island CpG island 11749
Tssr18281 2 71644298 to 71644318 20 + TSS region transcription start site region 18281