Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:71109783-71530255

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11735 2 71117808 to 71118716 908 CpG island CpG island 11735
Tssr18239 2 71118039 to 71118061 22 + TSS region transcription start site region 18239
Cybrd1 2 71118054 to 71142926 24872 + protein coding gene cytochrome b reductase 1
Tssr18240 2 71118075 to 71118096 21 + TSS region transcription start site region 18240
Tssr18241 2 71118104 to 71118113 9 + TSS region transcription start site region 18241
Tssr18242 2 71129775 to 71129801 26 + TSS region transcription start site region 18242
Gm39576 2 71155197 to 71159092 3895 + lncRNA gene predicted gene, 39576
Cpgi11736 2 71203823 to 71204094 271 CpG island CpG island 11736
Cpgi11737 2 71211659 to 71212323 664 CpG island CpG island 11737
Dync1i2 2 71211706 to 71263303 51597 + protein coding gene dynein cytoplasmic 1 intermediate chain 2
Tssr18243 2 71211713 to 71211794 81 + TSS region transcription start site region 18243
Tssr18244 2 71211795 to 71211812 17 + TSS region transcription start site region 18244
Tssr18245 2 71211828 to 71211839 11 + TSS region transcription start site region 18245
Tssr18246 2 71211941 to 71211996 55 + TSS region transcription start site region 18246
Tssr18247 2 71211998 to 71212012 14 + TSS region transcription start site region 18247
Tssr18248 2 71214425 to 71214462 37 + TSS region transcription start site region 18248
Tssr18249 2 71214472 to 71214498 26 + TSS region transcription start site region 18249
Tssr18250 2 71260843 to 71260856 13 + TSS region transcription start site region 18250
Tssr18251 2 71262871 to 71262926 55 + TSS region transcription start site region 18251
Slc25a12 2 71274270 to 71367554 93284 - protein coding gene solute carrier family 25 (mitochondrial carrier, Aralar), member 12
Tssr24470 2 71317568 to 71317589 21 - TSS region transcription start site region 24470
Tssr18252 2 71319730 to 71319743 13 + TSS region transcription start site region 18252
Gm13641 2 71319783 to 71320255 472 + pseudogene predicted gene 13641
Tssr24471 2 71334084 to 71334109 25 - TSS region transcription start site region 24471
Tssr18253 2 71334217 to 71334234 17 + TSS region transcription start site region 18253
Tssr18254 2 71334630 to 71334635 5 + TSS region transcription start site region 18254
Tssr24472 2 71338199 to 71338253 54 - TSS region transcription start site region 24472
Tssr24473 2 71338443 to 71338481 38 - TSS region transcription start site region 24473
Tssr24474 2 71342840 to 71342854 14 - TSS region transcription start site region 24474
Tssr24475 2 71347822 to 71347851 29 - TSS region transcription start site region 24475
Tssr18255 2 71347955 to 71347974 19 + TSS region transcription start site region 18255
Tssr18256 2 71348507 to 71348544 37 + TSS region transcription start site region 18256
Tssr18257 2 71356648 to 71356652 4 + TSS region transcription start site region 18257
5730410E19Rik 2 71356649 to 71357991 1342 unclassified non-coding RNA gene RIKEN cDNA 5730410E19 gene
Cpgi11738 2 71367188 to 71367910 722 CpG island CpG island 11738
Tssr24476 2 71367537 to 71367561 24 - TSS region transcription start site region 24476
Tssr24477 2 71367566 to 71367577 11 - TSS region transcription start site region 24477
Tssr24478 2 71367773 to 71367797 24 - TSS region transcription start site region 24478
Tssr24479 2 71376721 to 71376764 43 - TSS region transcription start site region 24479
Tssr18258 2 71388047 to 71388066 19 + TSS region transcription start site region 18258
Cpgi11739 2 71388986 to 71389744 758 CpG island CpG island 11739
Tssr24480 2 71389055 to 71389073 18 - TSS region transcription start site region 24480
Tssr24481 2 71389077 to 71389121 44 - TSS region transcription start site region 24481
Tssr18259 2 71389222 to 71389237 15 + TSS region transcription start site region 18259
Tssr18260 2 71389239 to 71389278 39 + TSS region transcription start site region 18260
Hat1 2 71389260 to 71441622 52362 + protein coding gene histone aminotransferase 1
Tssr18261 2 71389415 to 71389446 31 + TSS region transcription start site region 18261
Gm13642 2 71412537 to 71412917 380 - pseudogene predicted gene 13642
Tssr18262 2 71421229 to 71421242 13 + TSS region transcription start site region 18262
Tssr18263 2 71421662 to 71421682 20 + TSS region transcription start site region 18263
Tssr18264 2 71437100 to 71437146 46 + TSS region transcription start site region 18264
Gm23166 2 71450514 to 71450614 100 - snRNA gene predicted gene, 23166
Cpgi11740 2 71453058 to 71453821 763 CpG island CpG island 11740
Metap1d 2 71453281 to 71525196 71915 + protein coding gene methionyl aminopeptidase type 1D (mitochondrial)
Tssr18265 2 71453323 to 71453370 47 + TSS region transcription start site region 18265
Gm23253 2 71495271 to 71495374 103 + snRNA gene predicted gene, 23253
Tssr18266 2 71499584 to 71499603 19 + TSS region transcription start site region 18266
Tssr24482 2 71511285 to 71511289 4 - TSS region transcription start site region 24482
Gm46746 2 71514349 to 71515683 1334 - lncRNA gene predicted gene, 46746
A130022F02Rik 2 71517895 to 71522026 4131 unclassified gene RIKEN cDNA A130022F02 gene
Cpgi11741 2 71527393 to 71527720 327 CpG island CpG island 11741
Dlx1 2 71528113 to 71533981 5868 + protein coding gene distal-less homeobox 1
Cpgi11742 2 71528375 to 71530657 2282 CpG island CpG island 11742
Tssr18267 2 71528517 to 71528530 13 + TSS region transcription start site region 18267
Tssr18268 2 71528538 to 71528547 9 + TSS region transcription start site region 18268
Tssr18269 2 71528603 to 71528645 42 + TSS region transcription start site region 18269
Tssr18270 2 71528657 to 71528668 11 + TSS region transcription start site region 18270
Tssr18271 2 71529078 to 71529084 6 + TSS region transcription start site region 18271
Tssr18272 2 71529085 to 71529110 25 + TSS region transcription start site region 18272
Tssr18273 2 71529548 to 71529564 16 + TSS region transcription start site region 18273
Tssr18274 2 71529589 to 71529601 12 + TSS region transcription start site region 18274
Tssr24483 2 71529655 to 71529668 13 - TSS region transcription start site region 24483
Tssr18275 2 71529798 to 71529807 9 + TSS region transcription start site region 18275
Tssr18276 2 71529814 to 71529841 27 + TSS region transcription start site region 18276
Tssr18277 2 71529900 to 71529903 3 + TSS region transcription start site region 18277
Tssr18278 2 71529922 to 71529936 14 + TSS region transcription start site region 18278
Tssr518 2 71529968 to 71529973 5 + TSS region transcription start site region 518