Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:7086901-8966906

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Celf2 2 6539694 to 7396228 856534 - protein coding gene CUGBP, Elav-like family member 2
Tssr22506 2 7099306 to 7099325 19 - TSS region transcription start site region 22506
D2Mit313.1 2 7121469 to 7121585 116 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313.1
D2Mit313 2 7121553 to 7121697 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313
Tssr22507 2 7125577 to 7125583 6 - TSS region transcription start site region 22507
Tssr22508 2 7125599 to 7125610 11 - TSS region transcription start site region 22508
Tssr22509 2 7125653 to 7125662 9 - TSS region transcription start site region 22509
Tssr22510 2 7144665 to 7144679 14 - TSS region transcription start site region 22510
Tssr22511 2 7144769 to 7144780 11 - TSS region transcription start site region 22511
Tssr22512 2 7147781 to 7147785 4 - TSS region transcription start site region 22512
D2Dcr38 2 7197711 to 7197809 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 38
Tssr396 2 7200968 to 7200970 2 - TSS region transcription start site region 396
D2Dcr39 2 7222337 to 7222432 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 39
Tssr22513 2 7301861 to 7301874 13 - TSS region transcription start site region 22513
Tssr22514 2 7301912 to 7301919 7 - TSS region transcription start site region 22514
Tssr22515 2 7322648 to 7322651 3 - TSS region transcription start site region 22515
Tssr22516 2 7328291 to 7328296 5 - TSS region transcription start site region 22516
Gm24340 2 7350097 to 7350193 96 + snRNA gene predicted gene, 24340
Tssr22517 2 7395879 to 7395912 33 - TSS region transcription start site region 22517
Tssr22518 2 7395913 to 7395924 11 - TSS region transcription start site region 22518
Tssr22519 2 7395925 to 7395934 9 - TSS region transcription start site region 22519
Tssr397 2 7395934 to 7395937 3 - TSS region transcription start site region 397
Tssr398 2 7395948 to 7395955 7 - TSS region transcription start site region 398
Tssr22520 2 7395968 to 7396011 43 - TSS region transcription start site region 22520
Tssr22521 2 7396012 to 7396031 19 - TSS region transcription start site region 22521
Tssr22522 2 7396141 to 7396152 11 - TSS region transcription start site region 22522
Tssr22523 2 7396192 to 7396241 49 - TSS region transcription start site region 22523
Gm28641 2 7529939 to 7531307 1368 + lincRNA gene predicted gene 28641
D2Mit2 2 7532522 to 7532647 125 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 2
Gm13210 2 7631076 to 7631348 272 + pseudogene predicted gene 13210
Gm13211 2 7716151 to 7781408 65257 - lincRNA gene predicted gene 13211
D2Mit3 2 7718847 to 7719005 158 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 3
D2Nds2 2 7941244 to 7941360 116 DNA segment DNA segment, Chr 2, Nuffield Department of Surgery 2
Tssr16033 2 8026901 to 8026906 5 + TSS region transcription start site region 16033
Gm13254 2 8147200 to 8147798 598 - pseudogene predicted gene 13254
D2Mit177 2 8292071 to 8292182 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 177
D2Mit216 2 8309419 to 8309551 132 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 216
Tgq10 2 8319748 to 8319748 0 QTL triglyceride QTL 10
Tgq11 2 8319748 to 8319748 0 QTL triglyceride QTL 11
Gm30904 2 8337502 to 8345328 7826 - lncRNA gene predicted gene, 30904
D2Dcr40 2 8368535 to 8368635 100 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 40
D2Mit232S 2 8445599 to 8445718 119 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-232S
D2Mit232 2 8445725 to 8445872 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 232
Gm24534 2 8472094 to 8472384 290 - unclassified non-coding RNA gene predicted gene, 24534
Gm18721 2 8476486 to 8477153 667 + pseudogene predicted gene, 18721
Gm13255 2 8633937 to 8634483 546 + pseudogene predicted gene 13255
Tssr399 2 8730220 to 8730223 3 + TSS region transcription start site region 399
D2Mit117 2 8743596 to 8743770 174 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 117
Tssr16034 2 8797046 to 8797059 13 + TSS region transcription start site region 16034
Gm18434 2 8829240 to 8830394 1154 + pseudogene predicted gene, 18434
D2Dcr41 2 8845635 to 8845731 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 41
D2Mit358 2 8907393 to 8907473 80 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 358
D2Mit358S 2 8907490 to 8907612 122 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-358S
Gm30957 2 8946890 to 8975866 28976 + lncRNA gene predicted gene, 30957
Tssr16035 2 8946927 to 8946943 16 + TSS region transcription start site region 16035
Tssr16036 2 8946945 to 8946954 9 + TSS region transcription start site region 16036
Tssr16037 2 8946956 to 8946967 11 + TSS region transcription start site region 16037
Tssr16038 2 8947011 to 8947020 9 + TSS region transcription start site region 16038
Tssr16039 2 8950151 to 8950157 6 + TSS region transcription start site region 16039
Dwh 2 55801673 to 7718847 -48082826 heritable phenotypic marker dispersed white hair