Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:70543411-71103415

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gad1os 2 70489940 to 70563357 73417 - antisense lncRNA gene glutamate decarboxylase 1, opposite strand
Cpgi11726 2 70561160 to 70561625 465 CpG island CpG island 11726
Tssr18208 2 70561258 to 70561268 10 + TSS region transcription start site region 18208
Tssr18209 2 70561284 to 70561307 23 + TSS region transcription start site region 18209
Tssr18210 2 70561506 to 70561526 20 + TSS region transcription start site region 18210
Gad1 2 70561765 to 70602014 40249 + protein coding gene glutamate decarboxylase 1
Cpgi11727 2 70561928 to 70564134 2206 CpG island CpG island 11727
Tssr18211 2 70561986 to 70562003 17 + TSS region transcription start site region 18211
Tssr18212 2 70562007 to 70562037 30 + TSS region transcription start site region 18212
Tssr18213 2 70562112 to 70562123 11 + TSS region transcription start site region 18213
Tssr18214 2 70562132 to 70562143 11 + TSS region transcription start site region 18214
Tssr18215 2 70562147 to 70562208 61 + TSS region transcription start site region 18215
Tssr18216 2 70562854 to 70562871 17 + TSS region transcription start site region 18216
Tssr18217 2 70563318 to 70563330 12 + TSS region transcription start site region 18217
Tssr18218 2 70563373 to 70563433 60 + TSS region transcription start site region 18218
Tssr18219 2 70563435 to 70563461 26 + TSS region transcription start site region 18219
Tssr18220 2 70563536 to 70563547 11 + TSS region transcription start site region 18220
Tssr18221 2 70563551 to 70563572 21 + TSS region transcription start site region 18221
Tssr18222 2 70563629 to 70563663 34 + TSS region transcription start site region 18222
Tssr18223 2 70563677 to 70563709 32 + TSS region transcription start site region 18223
Cpgi11728 2 70566438 to 70566923 485 CpG island CpG island 11728
Cpgi11729 2 70568436 to 70568875 439 CpG island CpG island 11729
Tssr18224 2 70601723 to 70601762 39 + TSS region transcription start site region 18224
Gm16510 2 70618628 to 70618876 248 - pseudogene predicted pseudogene 16510
Gm46745 2 70620510 to 70623179 2669 - lncRNA gene predicted gene, 46745
Cpgi11730 2 70661038 to 70662400 1362 CpG island CpG island 11730
Gm26558 2 70661248 to 70662108 860 - protein coding gene predicted gene, 26558
Tssr18225 2 70661455 to 70661460 5 + TSS region transcription start site region 18225
Tssr18226 2 70661478 to 70661482 4 + TSS region transcription start site region 18226
Tssr18227 2 70661487 to 70661494 7 + TSS region transcription start site region 18227
Tssr18228 2 70661501 to 70661552 51 + TSS region transcription start site region 18228
Gorasp2 2 70661509 to 70691725 30216 + protein coding gene golgi reassembly stacking protein 2
Tssr18229 2 70661556 to 70661692 136 + TSS region transcription start site region 18229
Tssr18230 2 70672474 to 70672491 17 + TSS region transcription start site region 18230
Tssr18231 2 70678038 to 70678052 14 + TSS region transcription start site region 18231
Tssr18232 2 70690367 to 70690390 23 + TSS region transcription start site region 18232
Tssr18233 2 70690408 to 70690419 11 + TSS region transcription start site region 18233
Tssr18234 2 70690654 to 70690684 30 + TSS region transcription start site region 18234
Gm38528 2 70704093 to 70712644 8551 + lncRNA gene predicted gene, 38528
Cpgi11731 2 70704453 to 70704818 365 CpG island CpG island 11731
Tlk1 2 70712407 to 70825728 113321 - protein coding gene tousled-like kinase 1
Tssr24455 2 70726131 to 70726136 5 - TSS region transcription start site region 24455
Tssr24456 2 70746023 to 70746043 20 - TSS region transcription start site region 24456
D2Mit56 2 70750116 to 70750234 118 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 56
Tssr24457 2 70753318 to 70753323 5 - TSS region transcription start site region 24457
5830411J07Rik 2 70821659 to 70823432 1773 unclassified non-coding RNA gene RIKEN cDNA 5830411J07 gene
Tssr24458 2 70823411 to 70823415 4 - TSS region transcription start site region 24458
Tssr24459 2 70824689 to 70824694 5 - TSS region transcription start site region 24459
Cpgi11732 2 70824763 to 70826064 1301 CpG island CpG island 11732
Tssr24460 2 70825403 to 70825455 52 - TSS region transcription start site region 24460
Tssr24461 2 70825484 to 70825524 40 - TSS region transcription start site region 24461
Tssr24462 2 70825578 to 70825618 40 - TSS region transcription start site region 24462
Tssr24463 2 70825674 to 70825725 51 - TSS region transcription start site region 24463
Tssr24464 2 70825726 to 70825820 94 - TSS region transcription start site region 24464
Tssr24465 2 70825894 to 70825934 40 - TSS region transcription start site region 24465
Gm39842 2 70838881 to 70842814 3933 + lncRNA gene predicted gene, 39842
Tssr18235 2 70843540 to 70843551 11 + TSS region transcription start site region 18235
Gm13633 2 70856791 to 70857650 859 + pseudogene predicted gene 13633
D2Mit434 2 70872814 to 70872928 114 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 434
Gm13632 2 70877829 to 70884408 6579 + lincRNA gene predicted gene 13632
Gm39843 2 70923106 to 70937331 14225 + lncRNA gene predicted gene, 39843
Tssr18236 2 70931132 to 70931166 34 + TSS region transcription start site region 18236
Cpgi11733 2 70938586 to 70939125 539 CpG island CpG island 11733
Mettl8 2 70964561 to 71055583 91022 - protein coding gene methyltransferase like 8
D2Mit514 2 71021423 to 71021561 138 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-514
Tssr24466 2 71044973 to 71044981 8 - TSS region transcription start site region 24466
Dcaf17 2 71055328 to 71099142 43814 + protein coding gene DDB1 and CUL4 associated factor 17
Cpgi11734 2 71055347 to 71056337 990 CpG island CpG island 11734
Tssr24467 2 71055504 to 71055513 9 - TSS region transcription start site region 24467
Tssr24468 2 71055516 to 71055529 13 - TSS region transcription start site region 24468
Tssr24469 2 71055534 to 71055611 77 - TSS region transcription start site region 24469
Tssr18237 2 71055731 to 71055816 85 + TSS region transcription start site region 18237
Tssr18238 2 71084169 to 71084180 11 + TSS region transcription start site region 18238