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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:7039748-9599748

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121 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Celf2 2 6539694 to 7396228 856534 - protein coding gene CUGBP, Elav-like family member 2
Tssr22498 2 7044323 to 7044324 1 - TSS region transcription start site region 22498
2900046F13Rik 2 7045551 to 7046618 1067 unclassified gene RIKEN cDNA 2900046F13 gene
D2Dcr37 2 7062396 to 7062495 99 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 37
Gm26315 2 7076094 to 7076414 320 - unclassified non-coding RNA gene predicted gene, 26315
Gm26565 2 7077265 to 7081313 4048 + lincRNA gene predicted gene, 26565
Tssr22499 2 7081233 to 7081248 15 - TSS region transcription start site region 22499
Tssr22500 2 7081256 to 7081318 62 - TSS region transcription start site region 22500
Tssr22501 2 7083560 to 7083576 16 - TSS region transcription start site region 22501
Tssr22502 2 7083857 to 7083876 19 - TSS region transcription start site region 22502
Tssr22503 2 7085601 to 7085619 18 - TSS region transcription start site region 22503
Tssr22504 2 7085638 to 7085643 5 - TSS region transcription start site region 22504
Tssr22505 2 7085694 to 7085702 8 - TSS region transcription start site region 22505
Tssr22506 2 7099306 to 7099325 19 - TSS region transcription start site region 22506
D2Mit313.1 2 7121469 to 7121585 116 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313.1
D2Mit313 2 7121553 to 7121697 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313
Tssr22507 2 7125577 to 7125583 6 - TSS region transcription start site region 22507
Tssr22508 2 7125599 to 7125610 11 - TSS region transcription start site region 22508
Tssr22509 2 7125653 to 7125662 9 - TSS region transcription start site region 22509
Tssr22510 2 7144665 to 7144679 14 - TSS region transcription start site region 22510
Tssr22511 2 7144769 to 7144780 11 - TSS region transcription start site region 22511
Tssr22512 2 7147781 to 7147785 4 - TSS region transcription start site region 22512
D2Dcr38 2 7197711 to 7197809 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 38
Tssr396 2 7200968 to 7200970 2 - TSS region transcription start site region 396
D2Dcr39 2 7222337 to 7222432 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 39
Tssr22513 2 7301861 to 7301874 13 - TSS region transcription start site region 22513
Tssr22514 2 7301912 to 7301919 7 - TSS region transcription start site region 22514
Tssr22515 2 7322648 to 7322651 3 - TSS region transcription start site region 22515
Tssr22516 2 7328291 to 7328296 5 - TSS region transcription start site region 22516
Gm24340 2 7350097 to 7350193 96 + snRNA gene predicted gene, 24340
Tssr22517 2 7395879 to 7395912 33 - TSS region transcription start site region 22517
Tssr22518 2 7395913 to 7395924 11 - TSS region transcription start site region 22518
Tssr22519 2 7395925 to 7395934 9 - TSS region transcription start site region 22519
Tssr397 2 7395934 to 7395937 3 - TSS region transcription start site region 397
Tssr398 2 7395948 to 7395955 7 - TSS region transcription start site region 398
Tssr22520 2 7395968 to 7396011 43 - TSS region transcription start site region 22520
Tssr22521 2 7396012 to 7396031 19 - TSS region transcription start site region 22521
Tssr22522 2 7396141 to 7396152 11 - TSS region transcription start site region 22522
Tssr22523 2 7396192 to 7396241 49 - TSS region transcription start site region 22523
Gm28641 2 7529939 to 7531307 1368 + lincRNA gene predicted gene 28641
D2Mit2 2 7532522 to 7532647 125 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 2
Gm13210 2 7631076 to 7631348 272 + pseudogene predicted gene 13210
Gm13211 2 7716151 to 7781408 65257 - lincRNA gene predicted gene 13211
D2Mit3 2 7718847 to 7719005 158 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 3
D2Nds2 2 7941244 to 7941360 116 DNA segment DNA segment, Chr 2, Nuffield Department of Surgery 2
Tssr16033 2 8026901 to 8026906 5 + TSS region transcription start site region 16033
Gm13254 2 8147200 to 8147798 598 - pseudogene predicted gene 13254
D2Mit177 2 8292071 to 8292182 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 177
D2Mit216 2 8309419 to 8309551 132 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 216
Tgq10 2 8319748 to 8319748 0 QTL triglyceride QTL 10
Tgq11 2 8319748 to 8319748 0 QTL triglyceride QTL 11
Gm30904 2 8337502 to 8345328 7826 - lncRNA gene predicted gene, 30904
D2Dcr40 2 8368535 to 8368635 100 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 40
D2Mit232S 2 8445599 to 8445718 119 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-232S
D2Mit232 2 8445725 to 8445872 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 232
Gm24534 2 8472094 to 8472384 290 - unclassified non-coding RNA gene predicted gene, 24534
Gm18721 2 8476486 to 8477153 667 + pseudogene predicted gene, 18721
Gm13255 2 8633937 to 8634483 546 + pseudogene predicted gene 13255
Tssr399 2 8730220 to 8730223 3 + TSS region transcription start site region 399
D2Mit117 2 8743596 to 8743770 174 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 117
Tssr16034 2 8797046 to 8797059 13 + TSS region transcription start site region 16034
Gm18434 2 8829240 to 8830394 1154 + pseudogene predicted gene, 18434
D2Dcr41 2 8845635 to 8845731 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 41
D2Mit358 2 8907393 to 8907473 80 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 358
D2Mit358S 2 8907490 to 8907612 122 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-358S
Gm30957 2 8946890 to 8975866 28976 + lncRNA gene predicted gene, 30957
Tssr16035 2 8946927 to 8946943 16 + TSS region transcription start site region 16035
Tssr16036 2 8946945 to 8946954 9 + TSS region transcription start site region 16036
Tssr16037 2 8946956 to 8946967 11 + TSS region transcription start site region 16037
Tssr16038 2 8947011 to 8947020 9 + TSS region transcription start site region 16038
Tssr16039 2 8950151 to 8950157 6 + TSS region transcription start site region 16039
Gm10854 2 9034200 to 9035203 1003 protein coding gene predicted gene 10854
Gm13217 2 9041124 to 9042484 1360 - pseudogene predicted gene 13217
Cpgi11181 2 9042537 to 9042688 151 CpG island CpG island 11181
Tssr22524 2 9141476 to 9141519 43 - TSS region transcription start site region 22524
Tssr16040 2 9141662 to 9141700 38 + TSS region transcription start site region 16040
Tssr22525 2 9175767 to 9175774 7 - TSS region transcription start site region 22525
Tssr22526 2 9176055 to 9176059 4 - TSS region transcription start site region 22526
Tssr22527 2 9176824 to 9176833 9 - TSS region transcription start site region 22527
Tssr22528 2 9176860 to 9176869 9 - TSS region transcription start site region 22528
Tssr22529 2 9177873 to 9177895 22 - TSS region transcription start site region 22529
Tssr16041 2 9178031 to 9178042 11 + TSS region transcription start site region 16041
Tssr22530 2 9178717 to 9178725 8 - TSS region transcription start site region 22530
Tssr16042 2 9187837 to 9187848 11 + TSS region transcription start site region 16042
1700061F12Rik 2 9189515 to 9197477 7962 + lincRNA gene RIKEN cDNA 1700061F12 gene
Tssr16043 2 9189546 to 9189557 11 + TSS region transcription start site region 16043
Tssr16044 2 9189558 to 9189563 5 + TSS region transcription start site region 16044
Tssr16045 2 9189567 to 9189574 7 + TSS region transcription start site region 16045
Tssr16046 2 9193478 to 9193505 27 + TSS region transcription start site region 16046
Gm23963 2 9240756 to 9240832 76 - miRNA gene predicted gene, 23963
Gm13221 2 9270080 to 9270509 429 - pseudogene predicted gene 13221
D2Dcr42 2 9271650 to 9271752 102 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 42
Tssr22531 2 9304860 to 9304863 3 - TSS region transcription start site region 22531
Tssr22532 2 9305047 to 9305052 5 - TSS region transcription start site region 22532
Tssr16047 2 9305327 to 9305332 5 + TSS region transcription start site region 16047
D2Dcr43 2 9308713 to 9308809 96 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 43
Tssr16048 2 9313363 to 9313366 3 + TSS region transcription start site region 16048
D2Dcr44 2 9336209 to 9336314 105 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 44
D2Mit359 2 9348540 to 9348645 105 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 359
Gm13219 2 9352431 to 9447676 95245 + lincRNA gene predicted gene 13219
Tssr16049 2 9352468 to 9352480 12 + TSS region transcription start site region 16049
Tssr16050 2 9352481 to 9352499 18 + TSS region transcription start site region 16050
Tssr16051 2 9368462 to 9368511 49 + TSS region transcription start site region 16051
Tssr16052 2 9369038 to 9369053 15 + TSS region transcription start site region 16052
Tssr16053 2 9369064 to 9369075 11 + TSS region transcription start site region 16053
Tssr22533 2 9375933 to 9375937 4 - TSS region transcription start site region 22533
Tssr16054 2 9376280 to 9376325 45 + TSS region transcription start site region 16054
Tssr22534 2 9377953 to 9377964 11 - TSS region transcription start site region 22534
Tssr16055 2 9378241 to 9378261 20 + TSS region transcription start site region 16055
Tssr22535 2 9520132 to 9520135 3 - TSS region transcription start site region 22535
D2Mit5 2 9524642 to 9524778 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 5
Sluc16 2 9524642 to 9524778 136 QTL susceptibility to lung cancer 16
Gm13220 2 9575836 to 9576343 507 + pseudogene predicted gene 13220
Gm13218 2 9591218 to 9592938 1720 - lincRNA gene predicted gene 13218
Tssr22536 2 9593808 to 9593828 20 - TSS region transcription start site region 22536
Tssr22537 2 9593989 to 9594002 13 - TSS region transcription start site region 22537
Tssr22538 2 9594061 to 9594086 25 - TSS region transcription start site region 22538
Tssr22539 2 9594132 to 9594144 12 - TSS region transcription start site region 22539
Tssr22540 2 9594168 to 9594179 11 - TSS region transcription start site region 22540
Tssr16056 2 9595626 to 9595634 8 + TSS region transcription start site region 16056
Dwh 2 55801673 to 7718847 -48082826 heritable phenotypic marker dispersed white hair