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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69939126-70529195

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ubr3	2	69897246 to 70024013	126767	+	protein coding gene	ubiquitin protein ligase E3 component n-recognin 3
Gm13631	2	70038911 to 70042406	3495	+	unclassified non-coding RNA gene	predicted gene 13631
Tssr18187	2	70039114 to 70039125	11	+	TSS region	transcription start site region 18187
Myo3b	2	70039126 to 70429195	390069	+	protein coding gene	myosin IIIB
Tssr18188	2	70039267 to 70039306	39	+	TSS region	transcription start site region 18188
Tssr18189	2	70070033 to 70070076	43	+	TSS region	transcription start site region 18189
Tssr24452	2	70089714 to 70089736	22	-	TSS region	transcription start site region 24452
Tssr18190	2	70091926 to 70091931	5	+	TSS region	transcription start site region 18190
Tssr18191	2	70094971 to 70094984	13	+	TSS region	transcription start site region 18191
Tssr516	2	70135351 to 70135374	23	+	TSS region	transcription start site region 516
Tssr18192	2	70142970 to 70142975	5	+	TSS region	transcription start site region 18192
Tssr18193	2	70215815 to 70215822	7	+	TSS region	transcription start site region 18193
Gm46744	2	70408792 to 70427658	18866	-	lncRNA gene	predicted gene, 46744
D2Mit489.1	2	70413305 to 70413415	110		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 489.1
Tssr18194	2	70458945 to 70458956	11	+	TSS region	transcription start site region 18194
Rpl9-ps7	2	70458982 to 70459560	578	+	pseudogene	ribosomal protein L9, pseudogene 7
Cpgi11722	2	70471761 to 70472399	638		CpG island	CpG island 11722
Cpgi11723	2	70473410 to 70474662	1252		CpG island	CpG island 11723
Sp5	2	70474923 to 70477726	2803	+	protein coding gene	trans-acting transcription factor 5
Cpgi11724	2	70474980 to 70477383	2403		CpG island	CpG island 11724
Tssr18195	2	70475111 to 70475127	16	+	TSS region	transcription start site region 18195
Tssr18196	2	70475955 to 70475969	14	+	TSS region	transcription start site region 18196
Tssr18197	2	70475983 to 70476004	21	+	TSS region	transcription start site region 18197
Tssr18198	2	70476051 to 70476092	41	+	TSS region	transcription start site region 18198
Tssr517	2	70476162 to 70476200	38	+	TSS region	transcription start site region 517
Gad1os	2	70489940 to 70563357	73417	-	antisense lncRNA gene	glutamate decarboxylase 1, opposite strand
Erich2os	2	70503433 to 70509199	5766	-	antisense lncRNA gene	glutamate rich 2, opposite strand
Tssr18199	2	70508662 to 70508680	18	+	TSS region	transcription start site region 18199
Tssr18200	2	70508697 to 70508706	9	+	TSS region	transcription start site region 18200
Tssr18201	2	70508813 to 70508824	11	+	TSS region	transcription start site region 18201
Erich2	2	70508819 to 70540884	32065	+	protein coding gene	glutamate rich 2
Cpgi11725	2	70508828 to 70509813	985		CpG island	CpG island 11725
Tssr18202	2	70508832 to 70508839	7	+	TSS region	transcription start site region 18202
Tssr24453	2	70509206 to 70509219	13	-	TSS region	transcription start site region 24453
Tssr24454	2	70509267 to 70509293	26	-	TSS region	transcription start site region 24454
Tssr18203	2	70509344 to 70509382	38	+	TSS region	transcription start site region 18203
Tssr18204	2	70509421 to 70509470	49	+	TSS region	transcription start site region 18204
Tssr18205	2	70509490 to 70509502	12	+	TSS region	transcription start site region 18205
Gm37026	2	70523042 to 70523767	725	-	unclassified gene	predicted gene, 37026