Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69114739-69545241

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39840 2 69121470 to 69130178 8708 - lncRNA gene predicted gene, 39840
Tssr18105 2 69135783 to 69135797 14 + TSS region transcription start site region 18105
Tssr18106 2 69135799 to 69135861 62 + TSS region transcription start site region 18106
Nostrin 2 69135800 to 69189330 53530 + protein coding gene nitric oxide synthase trafficker
Tssr18107 2 69135863 to 69135887 24 + TSS region transcription start site region 18107
Spc25 2 69193895 to 69206194 12299 - protein coding gene SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Cpgi11708 2 69205652 to 69206368 716 CpG island CpG island 11708
Tssr24421 2 69206133 to 69206144 11 - TSS region transcription start site region 24421
Tssr24422 2 69206146 to 69206191 45 - TSS region transcription start site region 24422
Tssr24423 2 69206198 to 69206207 9 - TSS region transcription start site region 24423
G6pc2 2 69211073 to 69227841 16768 + protein coding gene glucose-6-phosphatase, catalytic, 2
Tssr18108 2 69219989 to 69220005 16 + TSS region transcription start site region 18108
Tssr24424 2 69237451 to 69237464 13 - TSS region transcription start site region 24424
Abcb11 2 69238282 to 69342616 104334 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 11
Gm13613 2 69248307 to 69272491 24184 + antisense lncRNA gene predicted gene 13613
Gm13614 2 69329739 to 69330241 502 + pseudogene predicted gene 13614
Tssr24425 2 69342558 to 69342570 12 - TSS region transcription start site region 24425
Tssr24426 2 69342578 to 69342592 14 - TSS region transcription start site region 24426
Tssr24427 2 69342604 to 69342624 20 - TSS region transcription start site region 24427
Tssr18109 2 69355614 to 69355628 14 + TSS region transcription start site region 18109
Gm36393 2 69378851 to 69405782 26931 - lncRNA gene predicted gene, 36393
Tssr24428 2 69380306 to 69380317 11 - TSS region transcription start site region 24428
Tssr18110 2 69380431 to 69380458 27 + TSS region transcription start site region 18110
Dhrs9 2 69380462 to 69403086 22624 + protein coding gene dehydrogenase/reductase (SDR family) member 9
Tssr18111 2 69380468 to 69380478 10 + TSS region transcription start site region 18111
Tssr18112 2 69380481 to 69380503 22 + TSS region transcription start site region 18112
Cpgi11709 2 69380506 to 69380681 175 CpG island CpG island 11709
Tssr18113 2 69380533 to 69380542 9 + TSS region transcription start site region 18113
Tssr513 2 69381909 to 69381922 13 - TSS region transcription start site region 513
Tssr18114 2 69382028 to 69382035 7 + TSS region transcription start site region 18114
Tssr18115 2 69382050 to 69382057 7 + TSS region transcription start site region 18115
Tssr18116 2 69382101 to 69382108 7 + TSS region transcription start site region 18116
Tssr24429 2 69382985 to 69383004 19 - TSS region transcription start site region 24429
Tssr24430 2 69383034 to 69383046 12 - TSS region transcription start site region 24430
Mdq4 2 69387396 to 69387396 0 QTL mammary ductal QTL 4
Tssr18117 2 69392986 to 69392995 9 + TSS region transcription start site region 18117
Tssr18118 2 69393056 to 69393090 34 + TSS region transcription start site region 18118
Tssr18119 2 69393102 to 69393175 73 + TSS region transcription start site region 18119
Tssr18120 2 69394152 to 69394193 41 + TSS region transcription start site region 18120
Tssr18121 2 69394209 to 69394257 48 + TSS region transcription start site region 18121
Tssr18122 2 69394486 to 69394502 16 + TSS region transcription start site region 18122
Tssr18123 2 69403966 to 69404014 48 + TSS region transcription start site region 18123
Tssr24431 2 69405819 to 69405846 27 - TSS region transcription start site region 24431
Tssr24432 2 69405851 to 69405862 11 - TSS region transcription start site region 24432
Tssr18124 2 69412788 to 69412804 16 + TSS region transcription start site region 18124
Tssr24433 2 69414508 to 69414519 11 - TSS region transcription start site region 24433
Tssr24434 2 69414633 to 69414637 4 - TSS region transcription start site region 24434
Lrp2 2 69424340 to 69586065 161725 - protein coding gene low density lipoprotein receptor-related protein 2
Tssr24435 2 69453224 to 69453230 6 - TSS region transcription start site region 24435
D2Mit327 2 69465036 to 69465161 125 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 327
Tssr24436 2 69491520 to 69491532 12 - TSS region transcription start site region 24436
Tssr24437 2 69522639 to 69522647 8 - TSS region transcription start site region 24437
Tssr24438 2 69533596 to 69533604 8 - TSS region transcription start site region 24438
Tssr24439 2 69533637 to 69533648 11 - TSS region transcription start site region 24439