Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:68382922-69662933

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195 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbwg1.12 2 65302068 to 68873081 3571013 QTL postnatal body weight growth 1.12
Stk39 2 68210445 to 68471981 261536 - protein coding gene serine/threonine kinase 39
Tssr24405 2 68386675 to 68386693 18 - TSS region transcription start site region 24405
Tssr24406 2 68389484 to 68389488 4 - TSS region transcription start site region 24406
Tssr24407 2 68409334 to 68409338 4 - TSS region transcription start site region 24407
Tssr24408 2 68415858 to 68415864 6 - TSS region transcription start site region 24408
Tssr18021 2 68421206 to 68421236 30 + TSS region transcription start site region 18021
Tssr24409 2 68426933 to 68426954 21 - TSS region transcription start site region 24409
Cpgi11706 2 68470812 to 68472658 1846 CpG island CpG island 11706
Tssr18022 2 68470844 to 68470855 11 + TSS region transcription start site region 18022
Tssr24410 2 68471878 to 68471911 33 - TSS region transcription start site region 24410
Tssr24411 2 68471925 to 68471944 19 - TSS region transcription start site region 24411
Tssr24412 2 68471945 to 68471994 49 - TSS region transcription start site region 24412
Tssr24413 2 68472002 to 68472118 116 - TSS region transcription start site region 24413
Tssr24414 2 68472120 to 68472137 17 - TSS region transcription start site region 24414
Tssr24415 2 68472138 to 68472145 7 - TSS region transcription start site region 24415
Tssr24416 2 68472279 to 68472317 38 - TSS region transcription start site region 24416
Gm13596 2 68476082 to 68477752 1670 + antisense lncRNA gene predicted gene 13596
Gm26321 2 68484143 to 68484384 241 + unclassified non-coding RNA gene predicted gene, 26321
Tssr18023 2 68554495 to 68554502 7 + TSS region transcription start site region 18023
Gm13597 2 68554555 to 68554929 374 + pseudogene predicted gene 13597
Tssr24417 2 68565375 to 68565387 12 - TSS region transcription start site region 24417
Tssr24418 2 68565394 to 68565398 4 - TSS region transcription start site region 24418
Tssr24419 2 68565403 to 68565417 14 - TSS region transcription start site region 24419
Tssr18024 2 68565657 to 68565676 19 + TSS region transcription start site region 18024
Gm49461 2 68566442 to 68574848 8406 + pseudogene predicted gene, 49461
Gm49462 2 68566992 to 68568555 1563 - lincRNA gene predicted gene, 49462
Tssr18025 2 68568562 to 68568571 9 + TSS region transcription start site region 18025
Tssr18026 2 68568577 to 68568584 7 + TSS region transcription start site region 18026
Tssr18027 2 68568592 to 68568649 57 + TSS region transcription start site region 18027
Gm36002 2 68578602 to 68582260 3658 - bidirectional promoter lncRNA gene predicted gene, 36002
Tssr24420 2 68582305 to 68582350 45 - TSS region transcription start site region 24420
Tssr18028 2 68582409 to 68582416 7 + TSS region transcription start site region 18028
4933409G03Rik 2 68582413 to 68616463 34050 + protein coding gene RIKEN cDNA 4933409G03 gene
Tssr18029 2 68582428 to 68582457 29 + TSS region transcription start site region 18029
4932414N04Rik 2 68656791 to 68748526 91735 + protein coding gene RIKEN cDNA 4932414N04 gene
Tssr18030 2 68726888 to 68726913 25 + TSS region transcription start site region 18030
D2Mit378 2 68805002 to 68805124 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 378
Gm36231 2 68820311 to 68845252 24941 - lincRNA gene predicted gene, 36231
Gm36174 2 68822381 to 68823838 1457 + lncRNA gene predicted gene, 36174
Tssr18031 2 68830757 to 68830778 21 + TSS region transcription start site region 18031
Gm13612 2 68831017 to 68831406 389 + pseudogene predicted gene 13612
Tssr18032 2 68845129 to 68845137 8 + TSS region transcription start site region 18032
Tssr18033 2 68861078 to 68861089 11 + TSS region transcription start site region 18033
Cpgi11707 2 68861081 to 68862554 1473 CpG island CpG island 11707
Tssr18034 2 68861110 to 68861154 44 + TSS region transcription start site region 18034
Tssr18035 2 68861433 to 68861510 77 + TSS region transcription start site region 18035
Cers6 2 68861441 to 69114282 252841 + protein coding gene ceramide synthase 6
Tssr18036 2 68861564 to 68861575 11 + TSS region transcription start site region 18036
Tssr18037 2 68863289 to 68863309 20 + TSS region transcription start site region 18037
Tssr18038 2 68868921 to 68868951 30 + TSS region transcription start site region 18038
Tssr18039 2 68870376 to 68870400 24 + TSS region transcription start site region 18039
Lgth1 2 68872932 to 68873081 149 QTL body length 1
D2Mit182 2 68872932 to 68873081 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 182
Tssr18040 2 68875067 to 68875070 3 + TSS region transcription start site region 18040
Tssr18041 2 68877952 to 68877967 15 + TSS region transcription start site region 18041
Tssr18042 2 68883550 to 68883570 20 + TSS region transcription start site region 18042
Gm37159 2 68891366 to 68894970 3604 + unclassified gene predicted gene, 37159
Tssr18043 2 68891382 to 68891386 4 + TSS region transcription start site region 18043
Tssr18044 2 68898875 to 68898893 18 + TSS region transcription start site region 18044
Tssr18045 2 68905300 to 68905303 3 + TSS region transcription start site region 18045
Tssr18046 2 68905680 to 68905718 38 + TSS region transcription start site region 18046
Tssr18047 2 68905869 to 68905885 16 + TSS region transcription start site region 18047
Gm38236 2 68906003 to 68909231 3228 + unclassified gene predicted gene, 38236
Tssr18048 2 68911613 to 68911629 16 + TSS region transcription start site region 18048
Tssr18049 2 68913565 to 68913577 12 + TSS region transcription start site region 18049
Tssr18050 2 68913669 to 68913677 8 + TSS region transcription start site region 18050
Tssr18051 2 68926091 to 68926096 5 + TSS region transcription start site region 18051
Tssr18052 2 68936259 to 68936268 9 + TSS region transcription start site region 18052
Tssr18053 2 68939528 to 68939540 12 + TSS region transcription start site region 18053
Tssr18054 2 68940624 to 68940644 20 + TSS region transcription start site region 18054
Tssr18055 2 68941829 to 68941840 11 + TSS region transcription start site region 18055
Tssr18056 2 68959818 to 68959834 16 + TSS region transcription start site region 18056
Tssr18057 2 68959839 to 68959850 11 + TSS region transcription start site region 18057
Tssr18058 2 68960339 to 68960359 20 + TSS region transcription start site region 18058
Tssr18059 2 68961130 to 68961150 20 + TSS region transcription start site region 18059
Gm37651 2 68962217 to 68963710 1493 + unclassified gene predicted gene, 37651
Tssr18060 2 68963263 to 68963274 11 + TSS region transcription start site region 18060
2010109K09Rik 2 68966750 to 68967621 871 unclassified gene RIKEN cDNA 2010109K09 gene
Tssr18061 2 68968837 to 68968842 5 + TSS region transcription start site region 18061
Tssr18062 2 68970845 to 68970853 8 + TSS region transcription start site region 18062
Tssr18063 2 68979189 to 68979209 20 + TSS region transcription start site region 18063
Tssr18064 2 68979450 to 68979473 23 + TSS region transcription start site region 18064
Tssr18065 2 68979503 to 68979506 3 + TSS region transcription start site region 18065
Tssr18066 2 68979649 to 68979668 19 + TSS region transcription start site region 18066
Gm37747 2 68989381 to 68993383 4002 + unclassified gene predicted gene, 37747
Tssr18067 2 68991375 to 68991389 14 + TSS region transcription start site region 18067
Tssr18068 2 68999874 to 68999886 12 + TSS region transcription start site region 18068
Tssr18069 2 68999947 to 68999961 14 + TSS region transcription start site region 18069
Tssr18070 2 68999964 to 68999975 11 + TSS region transcription start site region 18070
Tssr18071 2 68999979 to 68999991 12 + TSS region transcription start site region 18071
Tssr18072 2 69000364 to 69000371 7 + TSS region transcription start site region 18072
Tssr18073 2 69004838 to 69004849 11 + TSS region transcription start site region 18073
Tssr18074 2 69005309 to 69005319 10 + TSS region transcription start site region 18074
Tssr18075 2 69008398 to 69008418 20 + TSS region transcription start site region 18075
Tssr18076 2 69008420 to 69008435 15 + TSS region transcription start site region 18076
Tssr18077 2 69008442 to 69008455 13 + TSS region transcription start site region 18077
Tssr18078 2 69008534 to 69008547 13 + TSS region transcription start site region 18078
Tssr18079 2 69008580 to 69008595 15 + TSS region transcription start site region 18079
Tssr18080 2 69008605 to 69008615 10 + TSS region transcription start site region 18080
Gm37666 2 69013612 to 69014477 865 + unclassified gene predicted gene, 37666
Gm38377 2 69018096 to 69021867 3771 + unclassified gene predicted gene, 38377
Tssr18081 2 69022922 to 69022933 11 + TSS region transcription start site region 18081
Tssr18082 2 69022961 to 69022979 18 + TSS region transcription start site region 18082
Tssr18083 2 69022982 to 69023018 36 + TSS region transcription start site region 18083
Tssr18084 2 69031434 to 69031453 19 + TSS region transcription start site region 18084
Tssr18085 2 69035888 to 69035907 19 + TSS region transcription start site region 18085
Tssr18086 2 69036027 to 69036034 7 + TSS region transcription start site region 18086
Tssr18087 2 69036068 to 69036089 21 + TSS region transcription start site region 18087
Tssr18088 2 69057774 to 69057790 16 + TSS region transcription start site region 18088
Tssr18089 2 69071393 to 69071410 17 + TSS region transcription start site region 18089
Tssr18090 2 69075522 to 69075536 14 + TSS region transcription start site region 18090
Tssr18091 2 69091867 to 69091871 4 + TSS region transcription start site region 18091
Tssr18092 2 69092640 to 69092659 19 + TSS region transcription start site region 18092
Tssr18093 2 69093073 to 69093093 20 + TSS region transcription start site region 18093
Tssr18094 2 69093812 to 69093820 8 + TSS region transcription start site region 18094
Tssr18095 2 69105057 to 69105076 19 + TSS region transcription start site region 18095
Tssr18096 2 69109522 to 69109539 17 + TSS region transcription start site region 18096
Tssr18097 2 69109869 to 69109892 23 + TSS region transcription start site region 18097
Tssr18098 2 69109938 to 69109955 17 + TSS region transcription start site region 18098
Tssr18099 2 69111166 to 69111178 12 + TSS region transcription start site region 18099
Tssr18100 2 69112538 to 69112583 45 + TSS region transcription start site region 18100
Tssr18101 2 69113560 to 69113571 11 + TSS region transcription start site region 18101
Tssr18102 2 69113582 to 69113603 21 + TSS region transcription start site region 18102
Tssr18103 2 69113804 to 69113810 6 + TSS region transcription start site region 18103
Tssr18104 2 69114721 to 69114724 3 + TSS region transcription start site region 18104
Gm39840 2 69121470 to 69130178 8708 - lncRNA gene predicted gene, 39840
Tssr18105 2 69135783 to 69135797 14 + TSS region transcription start site region 18105
Tssr18106 2 69135799 to 69135861 62 + TSS region transcription start site region 18106
Nostrin 2 69135800 to 69189330 53530 + protein coding gene nitric oxide synthase trafficker
Tssr18107 2 69135863 to 69135887 24 + TSS region transcription start site region 18107
Spc25 2 69193895 to 69206194 12299 - protein coding gene SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Cpgi11708 2 69205652 to 69206368 716 CpG island CpG island 11708
Tssr24421 2 69206133 to 69206144 11 - TSS region transcription start site region 24421
Tssr24422 2 69206146 to 69206191 45 - TSS region transcription start site region 24422
Tssr24423 2 69206198 to 69206207 9 - TSS region transcription start site region 24423
G6pc2 2 69211073 to 69227841 16768 + protein coding gene glucose-6-phosphatase, catalytic, 2
Tssr18108 2 69219989 to 69220005 16 + TSS region transcription start site region 18108
Tssr24424 2 69237451 to 69237464 13 - TSS region transcription start site region 24424
Abcb11 2 69238282 to 69342616 104334 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 11
Gm13613 2 69248307 to 69272491 24184 + antisense lncRNA gene predicted gene 13613
Gm13614 2 69329739 to 69330241 502 + pseudogene predicted gene 13614
Tssr24425 2 69342558 to 69342570 12 - TSS region transcription start site region 24425
Tssr24426 2 69342578 to 69342592 14 - TSS region transcription start site region 24426
Tssr24427 2 69342604 to 69342624 20 - TSS region transcription start site region 24427
Tssr18109 2 69355614 to 69355628 14 + TSS region transcription start site region 18109
Gm36393 2 69378851 to 69405782 26931 - lncRNA gene predicted gene, 36393
Tssr24428 2 69380306 to 69380317 11 - TSS region transcription start site region 24428
Tssr18110 2 69380431 to 69380458 27 + TSS region transcription start site region 18110
Dhrs9 2 69380462 to 69403086 22624 + protein coding gene dehydrogenase/reductase (SDR family) member 9
Tssr18111 2 69380468 to 69380478 10 + TSS region transcription start site region 18111
Tssr18112 2 69380481 to 69380503 22 + TSS region transcription start site region 18112
Cpgi11709 2 69380506 to 69380681 175 CpG island CpG island 11709
Tssr18113 2 69380533 to 69380542 9 + TSS region transcription start site region 18113
Tssr513 2 69381909 to 69381922 13 - TSS region transcription start site region 513
Tssr18114 2 69382028 to 69382035 7 + TSS region transcription start site region 18114
Tssr18115 2 69382050 to 69382057 7 + TSS region transcription start site region 18115
Tssr18116 2 69382101 to 69382108 7 + TSS region transcription start site region 18116
Tssr24429 2 69382985 to 69383004 19 - TSS region transcription start site region 24429
Tssr24430 2 69383034 to 69383046 12 - TSS region transcription start site region 24430
Mdq4 2 69387396 to 69387396 0 QTL mammary ductal QTL 4
Tssr18117 2 69392986 to 69392995 9 + TSS region transcription start site region 18117
Tssr18118 2 69393056 to 69393090 34 + TSS region transcription start site region 18118
Tssr18119 2 69393102 to 69393175 73 + TSS region transcription start site region 18119
Tssr18120 2 69394152 to 69394193 41 + TSS region transcription start site region 18120
Tssr18121 2 69394209 to 69394257 48 + TSS region transcription start site region 18121
Tssr18122 2 69394486 to 69394502 16 + TSS region transcription start site region 18122
Tssr18123 2 69403966 to 69404014 48 + TSS region transcription start site region 18123
Tssr24431 2 69405819 to 69405846 27 - TSS region transcription start site region 24431
Tssr24432 2 69405851 to 69405862 11 - TSS region transcription start site region 24432
Tssr18124 2 69412788 to 69412804 16 + TSS region transcription start site region 18124
Tssr24433 2 69414508 to 69414519 11 - TSS region transcription start site region 24433
Tssr24434 2 69414633 to 69414637 4 - TSS region transcription start site region 24434
Lrp2 2 69424340 to 69586065 161725 - protein coding gene low density lipoprotein receptor-related protein 2
Tssr24435 2 69453224 to 69453230 6 - TSS region transcription start site region 24435
D2Mit327 2 69465036 to 69465161 125 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 327
Tssr24436 2 69491520 to 69491532 12 - TSS region transcription start site region 24436
Tssr24437 2 69522639 to 69522647 8 - TSS region transcription start site region 24437
Tssr24438 2 69533596 to 69533604 8 - TSS region transcription start site region 24438
Tssr24439 2 69533637 to 69533648 11 - TSS region transcription start site region 24439
Tssr24440 2 69550906 to 69550924 18 - TSS region transcription start site region 24440
Tssr24441 2 69564919 to 69564922 3 - TSS region transcription start site region 24441
D2Mit524 2 69570569 to 69570665 96 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 524
Cpgi11710 2 69585203 to 69586506 1303 CpG island CpG island 11710
Tssr24442 2 69586021 to 69586037 16 - TSS region transcription start site region 24442
Cpgi11711 2 69587970 to 69588220 250 CpG island CpG island 11711
Hctq6 2 69617675 to 69617792 117 QTL hematocrit QTL 6
D2Mit380 2 69617675 to 69617792 117 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 380
Hbbcq3 2 69617675 to 69617792 117 QTL hemoglobin concentration QTL 3
Cpgi11712 2 69629233 to 69629507 274 CpG island CpG island 11712
Tssr18125 2 69646837 to 69646849 12 + TSS region transcription start site region 18125
Tssr18126 2 69646866 to 69646875 9 + TSS region transcription start site region 18126
Cpgi11713 2 69647030 to 69647619 589 CpG island CpG island 11713
Bbs5 2 69647171 to 69667571 20400 + protein coding gene Bardet-Biedl syndrome 5 (human)
Tssr18127 2 69647211 to 69647272 61 + TSS region transcription start site region 18127