Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:6777396-7347495

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22467 2 6783763 to 6783795 32 - TSS region transcription start site region 22467
6430543K15Rik 2 6786267 to 6787514 1247 unclassified gene RIKEN cDNA 6430543K15 gene
Tssr22468 2 6825356 to 6825357 1 - TSS region transcription start site region 22468
Tssr22469 2 6858001 to 6858009 8 - TSS region transcription start site region 22469
Tssr16032 2 6871531 to 6871538 7 + TSS region transcription start site region 16032
Cpgi11180 2 6871844 to 6873111 1267 CpG island CpG island 11180
Tssr22470 2 6872254 to 6872282 28 - TSS region transcription start site region 22470
Tssr22471 2 6872392 to 6872496 104 - TSS region transcription start site region 22471
Tssr22472 2 6872507 to 6872534 27 - TSS region transcription start site region 22472
Tssr22473 2 6872535 to 6872579 44 - TSS region transcription start site region 22473
Tssr22474 2 6872588 to 6872615 27 - TSS region transcription start site region 22474
Tssr22475 2 6872619 to 6872703 84 - TSS region transcription start site region 22475
Tssr22476 2 6876701 to 6876718 17 - TSS region transcription start site region 22476
Gm13389 2 6884270 to 6886924 2654 + antisense lncRNA gene predicted gene 13389
Tssr22477 2 6884476 to 6884498 22 - TSS region transcription start site region 22477
Tssr22478 2 6884518 to 6884530 12 - TSS region transcription start site region 22478
Tssr22479 2 6884557 to 6884568 11 - TSS region transcription start site region 22479
Tssr22480 2 6884582 to 6884603 21 - TSS region transcription start site region 22480
Tssr22481 2 6884607 to 6884634 27 - TSS region transcription start site region 22481
Tssr22482 2 6884874 to 6884899 25 - TSS region transcription start site region 22482
Tssr22483 2 6884901 to 6884906 5 - TSS region transcription start site region 22483
Tssr22484 2 6884908 to 6884919 11 - TSS region transcription start site region 22484
Tssr22485 2 6884921 to 6884938 17 - TSS region transcription start site region 22485
Tssr22486 2 6884940 to 6884957 17 - TSS region transcription start site region 22486
Tssr22487 2 6884958 to 6884969 11 - TSS region transcription start site region 22487
Tssr22488 2 6884975 to 6884991 16 - TSS region transcription start site region 22488
Tssr22489 2 6885105 to 6885121 16 - TSS region transcription start site region 22489
Tssr22490 2 6885142 to 6885190 48 - TSS region transcription start site region 22490
Tssr22491 2 6885222 to 6885237 15 - TSS region transcription start site region 22491
Tssr22492 2 6885255 to 6885268 13 - TSS region transcription start site region 22492
D2Mit176 2 6885262 to 6885411 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 176
Tssr22493 2 6895635 to 6895642 7 - TSS region transcription start site region 22493
Tssr22494 2 6921421 to 6921424 3 - TSS region transcription start site region 22494
5031426D15Rik 2 6922702 to 6928722 6020 - lncRNA gene RIKEN cDNA 5031426D15 gene
Gm10855 2 6932544 to 6935075 2531 - sense intronic lncRNA gene predicted gene 10855
Tssr22495 2 6938430 to 6938436 6 - TSS region transcription start site region 22495
D2Mit215 2 6939736 to 6939870 134 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 215
Gm37340 2 6940625 to 6951061 10436 + unclassified gene predicted gene, 37340
Tssr22496 2 6949435 to 6949444 9 - TSS region transcription start site region 22496
Gm10115 2 6950453 to 6951680 1227 - sense intronic lncRNA gene predicted gene 10115
Tssr22497 2 7012650 to 7012654 4 - TSS region transcription start site region 22497
Tssr22498 2 7044323 to 7044324 1 - TSS region transcription start site region 22498
2900046F13Rik 2 7045551 to 7046618 1067 unclassified gene RIKEN cDNA 2900046F13 gene
D2Dcr37 2 7062396 to 7062495 99 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 37
Gm26315 2 7076094 to 7076414 320 - unclassified non-coding RNA gene predicted gene, 26315
Gm26565 2 7077265 to 7081313 4048 + lincRNA gene predicted gene, 26565
Tssr22499 2 7081233 to 7081248 15 - TSS region transcription start site region 22499
Tssr22500 2 7081256 to 7081318 62 - TSS region transcription start site region 22500
Tssr22501 2 7083560 to 7083576 16 - TSS region transcription start site region 22501
Tssr22502 2 7083857 to 7083876 19 - TSS region transcription start site region 22502
Tssr22503 2 7085601 to 7085619 18 - TSS region transcription start site region 22503
Tssr22504 2 7085638 to 7085643 5 - TSS region transcription start site region 22504
Tssr22505 2 7085694 to 7085702 8 - TSS region transcription start site region 22505
Tssr22506 2 7099306 to 7099325 19 - TSS region transcription start site region 22506
D2Mit313.1 2 7121469 to 7121585 116 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313.1
D2Mit313 2 7121553 to 7121697 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 313
Tssr22507 2 7125577 to 7125583 6 - TSS region transcription start site region 22507
Tssr22508 2 7125599 to 7125610 11 - TSS region transcription start site region 22508
Tssr22509 2 7125653 to 7125662 9 - TSS region transcription start site region 22509
Tssr22510 2 7144665 to 7144679 14 - TSS region transcription start site region 22510
Tssr22511 2 7144769 to 7144780 11 - TSS region transcription start site region 22511
Tssr22512 2 7147781 to 7147785 4 - TSS region transcription start site region 22512
D2Dcr38 2 7197711 to 7197809 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 38
Tssr396 2 7200968 to 7200970 2 - TSS region transcription start site region 396
D2Dcr39 2 7222337 to 7222432 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 39
Tssr22513 2 7301861 to 7301874 13 - TSS region transcription start site region 22513
Tssr22514 2 7301912 to 7301919 7 - TSS region transcription start site region 22514
Tssr22515 2 7322648 to 7322651 3 - TSS region transcription start site region 22515
Tssr22516 2 7328291 to 7328296 5 - TSS region transcription start site region 22516