MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:66624922-66944949

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cia23	2	12124726 to 66726109	54601383		QTL	collagen induced arthritis QTL 23
Scn9a	2	66480080 to 66634962	154882	-	protein coding gene	sodium channel, voltage-gated, type IX, alpha
Gm35265	2	66634421 to 66649849	15428	+	lncRNA gene	predicted gene, 35265
Cpgi11704	2	66634581 to 66635029	448		CpG island	CpG island 11704
Tssr24384	2	66634683 to 66634741	58	-	TSS region	transcription start site region 24384
Scn7a	2	66673426 to 66784910	111484	-	protein coding gene	sodium channel, voltage-gated, type VII, alpha
Tssr24385	2	66674850 to 66674855	5	-	TSS region	transcription start site region 24385
Tssr24386	2	66682700 to 66682705	5	-	TSS region	transcription start site region 24386
Tssr24387	2	66686180 to 66686189	9	-	TSS region	transcription start site region 24387
D2Mit91	2	66725932 to 66726109	177		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 91
Tssr24388	2	66730191 to 66730193	2	-	TSS region	transcription start site region 24388
Tssr24389	2	66750634 to 66750635	1	-	TSS region	transcription start site region 24389
Tssr24390	2	66784903 to 66784920	17	-	TSS region	transcription start site region 24390
Tssr24391	2	66784922 to 66784949	27	-	TSS region	transcription start site region 24391
Tssr24392	2	66785007 to 66785023	16	-	TSS region	transcription start site region 24392
Tssr24393	2	66785237 to 66785248	11	-	TSS region	transcription start site region 24393
Gm13600	2	66863262 to 66864775	1513	+	pseudogene	predicted gene 13600
Gm13602	2	66942558 to 66943050	492	+	pseudogene	predicted gene 13602