MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:66059327-66381617

Filter by:

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Galnt3	2	66082766 to 66124994	42228	-	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 3
Tssr24370	2	66102577 to 66102590	13	-	TSS region	transcription start site region 24370
Cpgi11702	2	66123913 to 66125347	1434		CpG island	CpG island 11702
Tssr24371	2	66124714 to 66124764	50	-	TSS region	transcription start site region 24371
Tssr24372	2	66124767 to 66124804	37	-	TSS region	transcription start site region 24372
Tssr24373	2	66124845 to 66124852	7	-	TSS region	transcription start site region 24373
Tssr24374	2	66125130 to 66125143	13	-	TSS region	transcription start site region 24374
Gm28638	2	66125317 to 66175250	49933	+	lincRNA gene	predicted gene 28638
Gm13616	2	66145654 to 66145875	221	-	pseudogene	predicted gene 13616
Tssr24375	2	66165380 to 66165386	6	-	TSS region	transcription start site region 24375
Ttc21b	2	66184327 to 66256617	72290	-	protein coding gene	tetratricopeptide repeat domain 21B
Gm13618	2	66187836 to 66192813	4977	+	antisense lncRNA gene	predicted gene 13618
Tssr24376	2	66210180 to 66210184	4	-	TSS region	transcription start site region 24376
Cpgi11703	2	66256234 to 66256874	640		CpG island	CpG island 11703
Tssr24377	2	66256576 to 66256645	69	-	TSS region	transcription start site region 24377
Scn1a	2	66270782 to 66440837	170055	-	protein coding gene	sodium channel, voltage-gated, type I, alpha
Tssr24378	2	66271219 to 66271222	3	-	TSS region	transcription start site region 24378
A230059G12Rik	2	66371836 to 66376010	4174		unclassified non-coding RNA gene	RIKEN cDNA A230059G12 gene