MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:65520934-65720945

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Scn3a	2	65457118 to 65567527	110409	-	protein coding gene	sodium channel, voltage-gated, type III, alpha
Tssr24365	2	65529275 to 65529278	3	-	TSS region	transcription start site region 24365
Gm34833	2	65552664 to 65585288	32624	+	lncRNA gene	predicted gene, 34833
Tssr17983	2	65553818 to 65553828	10	+	TSS region	transcription start site region 17983
Tssr17984	2	65553849 to 65553856	7	+	TSS region	transcription start site region 17984
Tssr24366	2	65567292 to 65567309	17	-	TSS region	transcription start site region 24366
Tssr24367	2	65567310 to 65567336	26	-	TSS region	transcription start site region 24367
Tssr24368	2	65567465 to 65567495	30	-	TSS region	transcription start site region 24368
Tssr24369	2	65567505 to 65567527	22	-	TSS region	transcription start site region 24369
Tssr17985	2	65620757 to 65620826	69	+	TSS region	transcription start site region 17985
Scn2a	2	65620771 to 65767447	146676	+	protein coding gene	sodium channel, voltage-gated, type II, alpha
Tssr17986	2	65620829 to 65620834	5	+	TSS region	transcription start site region 17986
Tssr17987	2	65620934 to 65620945	11	+	TSS region	transcription start site region 17987
Tssr17988	2	65620962 to 65620974	12	+	TSS region	transcription start site region 17988
D2Mit90	2	65665877 to 65665960	83		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 90
Tssr17989	2	65668730 to 65668746	16	+	TSS region	transcription start site region 17989
Tssr17990	2	65668753 to 65668769	16	+	TSS region	transcription start site region 17990