Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:65339402-65539590

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc38a11 2 65316633 to 65364026 47393 - protein coding gene solute carrier family 38, member 11
Tssr24361 2 65363925 to 65363936 11 - TSS region transcription start site region 24361
Tssr24362 2 65363940 to 65363950 10 - TSS region transcription start site region 24362
Cpgi11698 2 65363986 to 65364241 255 CpG island CpG island 11698
Tssr24363 2 65364011 to 65364066 55 - TSS region transcription start site region 24363
Mir6337 2 65364296 to 65364400 104 - miRNA gene microRNA 6337
Gm24138 2 65376169 to 65376282 113 - snoRNA gene predicted gene, 24138
Gm34688 2 65384734 to 65388674 3940 + lncRNA gene predicted gene, 34688
Gm34739 2 65401809 to 65415355 13546 - lncRNA gene predicted gene, 34739
Eae21 2 65439402 to 65439590 188 QTL experimental allergic encephalomyelitis susceptibility 21
D2Mit9 2 65439402 to 65439590 188 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 9
Alcw4 2 65439402 to 65439590 188 QTL alcohol withdrawal 4
Hdl1 2 65439402 to 65439590 188 QTL high density lipoprotein (HDL) level 1
Moo1 2 65439402 to 65439590 188 QTL modifier of obesity 1
Scn3a 2 65457118 to 65567527 110409 - protein coding gene sodium channel, voltage-gated, type III, alpha
Tssr24364 2 65458750 to 65458753 3 - TSS region transcription start site region 24364
Cpgi11699 2 65508449 to 65508602 153 CpG island CpG island 11699
Gm13595 2 65509265 to 65512605 3340 + antisense lncRNA gene predicted gene 13595
Tssr24365 2 65529275 to 65529278 3 - TSS region transcription start site region 24365
Mobq5 2 162677006 to 65439402 -97237604 QTL multigenic obesity QTL 5