MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:65264310-65404320

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pbwg1.3	2	57297111 to 65302151	8005040		QTL	postnatal body weight growth 1.3
Tssr17980	2	65277341 to 65277342	1	+	TSS region	transcription start site region 17980
Gm13592	2	65277417 to 65278426	1009	+	pseudogene	predicted gene 13592
Tssr24360	2	65293538 to 65293546	8	-	TSS region	transcription start site region 24360
Gm13593	2	65296190 to 65297369	1179	-	pseudogene	predicted gene 13593
Pbwg1.12	2	65302068 to 68873081	3571013		QTL	postnatal body weight growth 1.12
Pbwg1.10	2	65302068 to 65302151	83		QTL	postnatal body weight growth 1.10
D2Mit205	2	65302068 to 65302151	83		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 205
Slc38a11	2	65316633 to 65364026	47393	-	protein coding gene	solute carrier family 38, member 11
Tssr17981	2	65334310 to 65334320	10	+	TSS region	transcription start site region 17981
Tssr17982	2	65334323 to 65334331	8	+	TSS region	transcription start site region 17982
Tssr24361	2	65363925 to 65363936	11	-	TSS region	transcription start site region 24361
Tssr24362	2	65363940 to 65363950	10	-	TSS region	transcription start site region 24362
Cpgi11698	2	65363986 to 65364241	255		CpG island	CpG island 11698
Tssr24363	2	65364011 to 65364066	55	-	TSS region	transcription start site region 24363
Mir6337	2	65364296 to 65364400	104	-	miRNA gene	microRNA 6337
Gm24138	2	65376169 to 65376282	113	-	snoRNA gene	predicted gene, 24138
Gm34688	2	65384734 to 65388674	3940	+	lncRNA gene	predicted gene, 34688
Gm34739	2	65401809 to 65415355	13546	-	lncRNA gene	predicted gene, 34739