Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:6307067-6637076

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A230108P19Rik 2 6193251 to 6321611 128360 + antisense lncRNA gene RIKEN cDNA A230108P19 gene
Cpgi11176 2 6321938 to 6323573 1635 CpG island CpG island 11176
1700014B07Rik 2 6322262 to 6323079 817 protein coding gene RIKEN cDNA 1700014B07 gene
Tssr16020 2 6322621 to 6322647 26 + TSS region transcription start site region 16020
Usp6nl 2 6322667 to 6446390 123723 + protein coding gene USP6 N-terminal like
Tssr16021 2 6322751 to 6322783 32 + TSS region transcription start site region 16021
Tssr16022 2 6322786 to 6322860 74 + TSS region transcription start site region 16022
Tssr22444 2 6323074 to 6323096 22 - TSS region transcription start site region 22444
Tssr22445 2 6323155 to 6323171 16 - TSS region transcription start site region 22445
Tssr16023 2 6341020 to 6341031 11 + TSS region transcription start site region 16023
Tssr16024 2 6342664 to 6342668 4 + TSS region transcription start site region 16024
Cpgi11177 2 6352816 to 6353060 244 CpG island CpG island 11177
Tssr16025 2 6386283 to 6386306 23 + TSS region transcription start site region 16025
Gm13388 2 6431786 to 6436033 4247 - antisense lncRNA gene predicted gene 13388
Tssr16026 2 6471991 to 6472004 13 + TSS region transcription start site region 16026
Gm13391 2 6472000 to 6478619 6619 + lincRNA gene predicted gene 13391
Tssr16027 2 6472027 to 6472052 25 + TSS region transcription start site region 16027
Tssr16028 2 6472067 to 6472076 9 + TSS region transcription start site region 16028
Cpgi11178 2 6478382 to 6478534 152 CpG island CpG island 11178
Gm38386 2 6479690 to 6483110 3420 + unclassified gene predicted gene, 38386
Cpgi11179 2 6523746 to 6524208 462 CpG island CpG island 11179
Celf2 2 6539694 to 7396228 856534 - protein coding gene CUGBP, Elav-like family member 2
Tssr22446 2 6542728 to 6542745 17 - TSS region transcription start site region 22446
Tssr22447 2 6543977 to 6544006 29 - TSS region transcription start site region 22447
Tssr22448 2 6546066 to 6546077 11 - TSS region transcription start site region 22448
Tssr22449 2 6549956 to 6549967 11 - TSS region transcription start site region 22449
C230011H18Rik 2 6566135 to 6569262 3127 unclassified gene RIKEN cDNA C230011H18 gene
Tssr395 2 6570522 to 6570524 2 + TSS region transcription start site region 395
Tssr16029 2 6582915 to 6582950 35 + TSS region transcription start site region 16029
Tssr22450 2 6583716 to 6583725 9 - TSS region transcription start site region 22450
Tssr22451 2 6592801 to 6592831 30 - TSS region transcription start site region 22451
Tssr22452 2 6627934 to 6627939 5 - TSS region transcription start site region 22452