Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:62643259-63533265

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ifih1 2 62595798 to 62646255 50457 - protein coding gene interferon induced with helicase C domain 1
Tssr24309 2 62645544 to 62645598 54 - TSS region transcription start site region 24309
Tssr24310 2 62645606 to 62645638 32 - TSS region transcription start site region 24310
Cpgi11692 2 62645647 to 62646398 751 CpG island CpG island 11692
Tssr24311 2 62645942 to 62645964 22 - TSS region transcription start site region 24311
Tssr24312 2 62646146 to 62646234 88 - TSS region transcription start site region 24312
Tssr17964 2 62646294 to 62646304 10 + TSS region transcription start site region 17964
Cpgi11693 2 62664199 to 62664673 474 CpG island CpG island 11693
Tssr17965 2 62664279 to 62664300 21 + TSS region transcription start site region 17965
Tssr17966 2 62664306 to 62664311 5 + TSS region transcription start site region 17966
Tssr17967 2 62664319 to 62664335 16 + TSS region transcription start site region 17967
Gca 2 62664327 to 62694109 29782 + protein coding gene grancalcin
Gm13590 2 62668796 to 62670370 1574 - pseudogene predicted gene 13590
Tssr17968 2 62686137 to 62686168 31 + TSS region transcription start site region 17968
Tssr17969 2 62692613 to 62692633 20 + TSS region transcription start site region 17969
Tssr17970 2 62692724 to 62692766 42 + TSS region transcription start site region 17970
Kcnh7 2 62699300 to 63184287 484987 - protein coding gene potassium voltage-gated channel, subfamily H (eag-related), member 7
Tssr24313 2 62773410 to 62773413 3 - TSS region transcription start site region 24313
Tssr24314 2 62800728 to 62800733 5 - TSS region transcription start site region 24314
Gm22020 2 62802489 to 62802624 135 - snoRNA gene predicted gene, 22020
Gm13569 2 62809187 to 62810698 1511 + antisense lncRNA gene predicted gene 13569
Tssr17971 2 62968177 to 62968182 5 + TSS region transcription start site region 17971
Tssr17972 2 62968194 to 62968203 9 + TSS region transcription start site region 17972
Tssr24315 2 63080103 to 63080111 8 - TSS region transcription start site region 24315
Tssr24316 2 63088259 to 63088265 6 - TSS region transcription start site region 24316
Tssr24317 2 63113123 to 63113133 10 - TSS region transcription start site region 24317
Tssr24318 2 63123905 to 63123909 4 - TSS region transcription start site region 24318
Cpgi11694 2 63183938 to 63184518 580 CpG island CpG island 11694
Tssr24319 2 63184184 to 63184195 11 - TSS region transcription start site region 24319
Gm34110 2 63184214 to 63196617 12403 + lncRNA gene predicted gene, 34110
Tssr24320 2 63184236 to 63184252 16 - TSS region transcription start site region 24320
Tssr24321 2 63184253 to 63184292 39 - TSS region transcription start site region 24321
Tssr24322 2 63184298 to 63184335 37 - TSS region transcription start site region 24322
Tssr24323 2 63184458 to 63184469 11 - TSS region transcription start site region 24323
Tssr24324 2 63184534 to 63184549 15 - TSS region transcription start site region 24324
Tssr24325 2 63184554 to 63184566 12 - TSS region transcription start site region 24325
Tssr17973 2 63221852 to 63221853 1 + TSS region transcription start site region 17973
Gm34291 2 63230353 to 63269980 39627 - lncRNA gene predicted gene, 34291
Gm23503 2 63432088 to 63432194 106 - snRNA gene predicted gene, 23503
Gm8541 2 63525464 to 63575288 49824 - unclassified gene predicted gene 8541