Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:61806515-62566743

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbr1 2 61802930 to 61814114 11184 + protein coding gene T-box brain gene 1
Cpgi11688 2 61807118 to 61807486 368 CpG island CpG island 11688
Cpgi11689 2 61811237 to 61812578 1341 CpG island CpG island 11689
Tssr17945 2 61812506 to 61812517 11 + TSS region transcription start site region 17945
Tssr17946 2 61812556 to 61812575 19 + TSS region transcription start site region 17946
Tssr17947 2 61812944 to 61812960 16 + TSS region transcription start site region 17947
Cpgi11690 2 61815012 to 61816317 1305 CpG island CpG island 11690
Gm39837 2 61905380 to 61925936 20556 + lncRNA gene predicted gene, 39837
Gm13555 2 61970354 to 61970672 318 - pseudogene predicted gene 13555
D2Mit516 2 62021247 to 62021362 115 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-516
Tssr17948 2 62046491 to 62046505 14 + TSS region transcription start site region 17948
Tssr17949 2 62046511 to 62046571 60 + TSS region transcription start site region 17949
Slc4a10 2 62046515 to 62326743 280228 + protein coding gene solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
Tssr17950 2 62046580 to 62046593 13 + TSS region transcription start site region 17950
Tssr506 2 62046598 to 62046611 13 + TSS region transcription start site region 506
Tssr17951 2 62046614 to 62046621 7 + TSS region transcription start site region 17951
Tssr17952 2 62046623 to 62046634 11 + TSS region transcription start site region 17952
Tssr17953 2 62147771 to 62147786 15 + TSS region transcription start site region 17953
Tssr17954 2 62147802 to 62147826 24 + TSS region transcription start site region 17954
Tssr17955 2 62147828 to 62147873 45 + TSS region transcription start site region 17955
Tssr17956 2 62147973 to 62147976 3 + TSS region transcription start site region 17956
Tssr17957 2 62325937 to 62325939 2 + TSS region transcription start site region 17957
Dpp4 2 62330073 to 62412231 82158 - protein coding gene dipeptidylpeptidase 4
Tssr507 2 62343522 to 62343537 15 - TSS region transcription start site region 507
Tssr24253 2 62343633 to 62343653 20 - TSS region transcription start site region 24253
Tssr24254 2 62343657 to 62343668 11 - TSS region transcription start site region 24254
Tssr24255 2 62343670 to 62343701 31 - TSS region transcription start site region 24255
Tssr24256 2 62343728 to 62343739 11 - TSS region transcription start site region 24256
Tssr24257 2 62343817 to 62343831 14 - TSS region transcription start site region 24257
Tssr24258 2 62343967 to 62343974 7 - TSS region transcription start site region 24258
Tssr24259 2 62352132 to 62352177 45 - TSS region transcription start site region 24259
Tssr24260 2 62394933 to 62394940 7 - TSS region transcription start site region 24260
Tssr17958 2 62395146 to 62395169 23 + TSS region transcription start site region 17958
Tssr17959 2 62395186 to 62395197 11 + TSS region transcription start site region 17959
Tssr17960 2 62397943 to 62397948 5 + TSS region transcription start site region 17960
Tssr17961 2 62409079 to 62409085 6 + TSS region transcription start site region 17961
Cpgi11691 2 62411246 to 62412125 879 CpG island CpG island 11691
Tssr24261 2 62411294 to 62411336 42 - TSS region transcription start site region 24261
Tssr24262 2 62411695 to 62411706 11 - TSS region transcription start site region 24262
Tssr24263 2 62411806 to 62411822 16 - TSS region transcription start site region 24263
Tssr24264 2 62411838 to 62411864 26 - TSS region transcription start site region 24264
Tssr24265 2 62411870 to 62411910 40 - TSS region transcription start site region 24265
Tssr24266 2 62411957 to 62411974 17 - TSS region transcription start site region 24266
Tssr24267 2 62411991 to 62412023 32 - TSS region transcription start site region 24267
Tssr24268 2 62412172 to 62412183 11 - TSS region transcription start site region 24268
Tssr508 2 62412197 to 62412206 9 - TSS region transcription start site region 508
Tssr24269 2 62412219 to 62412234 15 - TSS region transcription start site region 24269
Tssr24270 2 62412300 to 62412309 9 - TSS region transcription start site region 24270
Tssr24271 2 62412316 to 62412335 19 - TSS region transcription start site region 24271
Gm13565 2 62436880 to 62441142 4262 - lincRNA gene predicted gene 13565
Gm13564 2 62452936 to 62456648 3712 - lincRNA gene predicted gene 13564
Gm13561 2 62455105 to 62468917 13812 + antisense lncRNA gene predicted gene 13561
Gcg 2 62474530 to 62483650 9120 - protein coding gene glucagon
Tssr24272 2 62480490 to 62480499 9 - TSS region transcription start site region 24272
Tssr24273 2 62483637 to 62483653 16 - TSS region transcription start site region 24273
Fap 2 62500943 to 62574075 73132 - protein coding gene fibroblast activation protein
Vclq1 2 137000000 to 62000000 -75000000 QTL curvilinear velocity QTL 1