Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:61775354-62165672

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psmd14 2 61711694 to 61800376 88682 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
Tssr17935 2 61776663 to 61776691 28 + TSS region transcription start site region 17935
Gm25966 2 61798180 to 61798296 116 + rRNA gene predicted gene, 25966
Tbr1 2 61802930 to 61814114 11184 + protein coding gene T-box brain gene 1
Tssr17936 2 61804501 to 61804538 37 + TSS region transcription start site region 17936
Tssr17937 2 61804574 to 61804627 53 + TSS region transcription start site region 17937
Tssr17938 2 61804638 to 61804645 7 + TSS region transcription start site region 17938
Tssr17939 2 61804686 to 61804701 15 + TSS region transcription start site region 17939
Tssr17940 2 61804757 to 61804766 9 + TSS region transcription start site region 17940
Tssr505 2 61804777 to 61804787 10 + TSS region transcription start site region 505
Tssr17941 2 61804887 to 61804906 19 + TSS region transcription start site region 17941
Cpgi11687 2 61804892 to 61805911 1019 CpG island CpG island 11687
Tssr17942 2 61804976 to 61804996 20 + TSS region transcription start site region 17942
Tssr17943 2 61805024 to 61805038 14 + TSS region transcription start site region 17943
Tssr17944 2 61805040 to 61805053 13 + TSS region transcription start site region 17944
Cpgi11688 2 61807118 to 61807486 368 CpG island CpG island 11688
Cpgi11689 2 61811237 to 61812578 1341 CpG island CpG island 11689
Tssr17945 2 61812506 to 61812517 11 + TSS region transcription start site region 17945
Tssr17946 2 61812556 to 61812575 19 + TSS region transcription start site region 17946
Tssr17947 2 61812944 to 61812960 16 + TSS region transcription start site region 17947
Cpgi11690 2 61815012 to 61816317 1305 CpG island CpG island 11690
Gm39837 2 61905380 to 61925936 20556 + lncRNA gene predicted gene, 39837
Gm13555 2 61970354 to 61970672 318 - pseudogene predicted gene 13555
D2Mit516 2 62021247 to 62021362 115 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-516
Tssr17948 2 62046491 to 62046505 14 + TSS region transcription start site region 17948
Tssr17949 2 62046511 to 62046571 60 + TSS region transcription start site region 17949
Slc4a10 2 62046515 to 62326743 280228 + protein coding gene solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
Tssr17950 2 62046580 to 62046593 13 + TSS region transcription start site region 17950
Tssr506 2 62046598 to 62046611 13 + TSS region transcription start site region 506
Tssr17951 2 62046614 to 62046621 7 + TSS region transcription start site region 17951
Tssr17952 2 62046623 to 62046634 11 + TSS region transcription start site region 17952
Tssr17953 2 62147771 to 62147786 15 + TSS region transcription start site region 17953
Tssr17954 2 62147802 to 62147826 24 + TSS region transcription start site region 17954
Tssr17955 2 62147828 to 62147873 45 + TSS region transcription start site region 17955
Tssr17956 2 62147973 to 62147976 3 + TSS region transcription start site region 17956
Vclq1 2 137000000 to 62000000 -75000000 QTL curvilinear velocity QTL 1