MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:60648784-60728922

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Itgb6	2	60598292 to 60722603	124311	-	protein coding gene	integrin beta 6
Tssr24207	2	60673644 to 60673653	9	-	TSS region	transcription start site region 24207
Tssr24208	2	60673654 to 60673731	77	-	TSS region	transcription start site region 24208
D2Mit34	2	60688784 to 60688922	138		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 34
D2Mit61	2	60690268 to 60690412	144		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 61
Pbwg1.5	2	60690268 to 60690412	144		QTL	postnatal body weight growth 1.5
Pitm1	2	60690268 to 60690412	144		QTL	prion incubation time 1
Ap2q	2	60690268 to 60690412	144		QTL	alcohol preference 2 QTL
Cia2	2	60690268 to 60690412	144		QTL	collagen induced arthritis QTL 2
Cia4	2	60690268 to 60690412	144		QTL	collagen induced arthritis QTL 4
Gm33436	2	60692240 to 60717713	25473	+	lncRNA gene	predicted gene, 33436
Tssr24209	2	60700121 to 60700125	4	-	TSS region	transcription start site region 24209
Tssr24210	2	60705566 to 60705590	24	-	TSS region	transcription start site region 24210
Tssr24211	2	60705595 to 60705609	14	-	TSS region	transcription start site region 24211
Cpgi11681	2	60717473 to 60717678	205		CpG island	CpG island 11681
Tssr24212	2	60722531 to 60722542	11	-	TSS region	transcription start site region 24212
Tssr24213	2	60722636 to 60722657	21	-	TSS region	transcription start site region 24213
Tssr24214	2	60722670 to 60722671	1	-	TSS region	transcription start site region 24214
Trmq3	2	119525037 to 60690268	-58834769		QTL	T cell ratio modifier QTL 3