Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:6005078-6255089

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Upf2 2 5951469 to 6056703 105234 + protein coding gene UPF2 regulator of nonsense transcripts homolog (yeast)
Gm30136 2 6079581 to 6083053 3472 + lncRNA gene predicted gene, 30136
Tssr22435 2 6081158 to 6081161 3 - TSS region transcription start site region 22435
Proser2 2 6098493 to 6130293 31800 - protein coding gene proline and serine rich 2
Cpgi11174 2 6100159 to 6101214 1055 CpG island CpG island 11174
Cpgi11175 2 6129545 to 6130547 1002 CpG island CpG island 11175
Tssr22436 2 6130035 to 6130055 20 - TSS region transcription start site region 22436
Tssr22437 2 6130078 to 6130089 11 - TSS region transcription start site region 22437
Tssr22438 2 6130097 to 6130106 9 - TSS region transcription start site region 22438
Tssr22439 2 6130117 to 6130167 50 - TSS region transcription start site region 22439
Gm13384 2 6132211 to 6133956 1745 - pseudogene predicted gene 13384
Gm10857 2 6132869 to 6140568 7699 + lincRNA gene predicted gene 10857
Echdc3 2 6188465 to 6212994 24529 - protein coding gene enoyl Coenzyme A hydratase domain containing 3
A230108P19Rik 2 6193251 to 6321611 128360 + antisense lncRNA gene RIKEN cDNA A230108P19 gene
Gm30185 2 6208596 to 6211567 2971 - lncRNA gene predicted gene, 30185
Tssr16018 2 6209863 to 6209866 3 + TSS region transcription start site region 16018
Tssr22440 2 6212973 to 6212977 4 - TSS region transcription start site region 22440
Tssr22441 2 6212980 to 6213002 22 - TSS region transcription start site region 22441
Tssr22442 2 6213035 to 6213044 9 - TSS region transcription start site region 22442