Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:5998493-6230293

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Upf2	2	5951469 to 6056703	105234	+	protein coding gene	UPF2 regulator of nonsense transcripts homolog (yeast)
Gm30136	2	6079581 to 6083053	3472	+	lncRNA gene	predicted gene, 30136
Tssr22435	2	6081158 to 6081161	3	-	TSS region	transcription start site region 22435
Proser2	2	6098493 to 6130293	31800	-	protein coding gene	proline and serine rich 2
Cpgi11174	2	6100159 to 6101214	1055		CpG island	CpG island 11174
Cpgi11175	2	6129545 to 6130547	1002		CpG island	CpG island 11175
Tssr22436	2	6130035 to 6130055	20	-	TSS region	transcription start site region 22436
Tssr22437	2	6130078 to 6130089	11	-	TSS region	transcription start site region 22437
Tssr22438	2	6130097 to 6130106	9	-	TSS region	transcription start site region 22438
Tssr22439	2	6130117 to 6130167	50	-	TSS region	transcription start site region 22439
Gm13384	2	6132211 to 6133956	1745	-	pseudogene	predicted gene 13384
Gm10857	2	6132869 to 6140568	7699	+	lincRNA gene	predicted gene 10857
Echdc3	2	6188465 to 6212994	24529	-	protein coding gene	enoyl Coenzyme A hydratase domain containing 3
A230108P19Rik	2	6193251 to 6321611	128360	+	antisense lncRNA gene	RIKEN cDNA A230108P19 gene
Gm30185	2	6208596 to 6211567	2971	-	lncRNA gene	predicted gene, 30185
Tssr16018	2	6209863 to 6209866	3	+	TSS region	transcription start site region 16018
Tssr22440	2	6212973 to 6212977	4	-	TSS region	transcription start site region 22440
Tssr22441	2	6212980 to 6213002	22	-	TSS region	transcription start site region 22441
Tssr22442	2	6213035 to 6213044	9	-	TSS region	transcription start site region 22442