Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:59333331-59433592

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkp4 2 59160850 to 59355205 194355 + protein coding gene plakophilin 4
Tssr17851 2 59338693 to 59338704 11 + TSS region transcription start site region 17851
Tssr17852 2 59338714 to 59338729 15 + TSS region transcription start site region 17852
Tssr17853 2 59338749 to 59338760 11 + TSS region transcription start site region 17853
Tssr17854 2 59351898 to 59351905 7 + TSS region transcription start site region 17854
Tssr17855 2 59380886 to 59380888 2 + TSS region transcription start site region 17855
5330411J11Rik 2 59382493 to 59386682 4189 - lncRNA gene RIKEN cDNA 5330411J11 gene
Cpgi11669 2 59383331 to 59383592 261 CpG island CpG island 11669
Tssr17856 2 59384120 to 59384128 8 + TSS region transcription start site region 17856
Gm13551 2 59396488 to 59396917 429 + pseudogene predicted gene 13551
Gm13549 2 59398986 to 59399781 795 - pseudogene predicted gene 13549
Gm46743 2 59400738 to 59420501 19763 - lncRNA gene predicted gene, 46743
D2Mit123 2 59404418 to 59404558 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 123