MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:5827080-5897934

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdc123	2	5794294 to 5844968	50674	-	protein coding gene	cell division cycle 123
Gm29984	2	5825418 to 5830815	5397	+	lncRNA gene	predicted gene, 29984
Cpgi11169	2	5844620 to 5845694	1074		CpG island	CpG island 11169
Tssr22429	2	5844917 to 5844985	68	-	TSS region	transcription start site region 22429
Tssr16006	2	5845017 to 5845062	45	+	TSS region	transcription start site region 16006
Nudt5	2	5845034 to 5870820	25786	+	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 5
Tssr16007	2	5845243 to 5845311	68	+	TSS region	transcription start site region 16007
Tssr16008	2	5848120 to 5848134	14	+	TSS region	transcription start site region 16008
Tssr16009	2	5852845 to 5852857	12	+	TSS region	transcription start site region 16009
Gm13199	2	5862080 to 5862934	854	-	protein coding gene	predicted gene 13199
Sec61a2	2	5870987 to 5895432	24445	-	protein coding gene	Sec61, alpha subunit 2 (S. cerevisiae)
B930028L11Rik	2	5887225 to 5889499	2274		unclassified gene	RIKEN cDNA B930028L11 gene
Cpgi11170	2	5894950 to 5895579	629		CpG island	CpG island 11170
Tssr22430	2	5895325 to 5895408	83	-	TSS region	transcription start site region 22430
Tssr16010	2	5895456 to 5895475	19	+	TSS region	transcription start site region 16010
Tssr16011	2	5895489 to 5895513	24	+	TSS region	transcription start site region 16011
Gm13267	2	5895510 to 5900131	4621	+	antisense lncRNA gene	predicted gene 13267
Dhtkd1	2	5896115 to 5942792	46677	-	protein coding gene	dehydrogenase E1 and transketolase domain containing 1