Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:57127443-57457461

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
BB557941 2 57127479 to 57181754 54275 - lncRNA gene expressed sequence BB557941
Cpgi11661 2 57181657 to 57182145 488 CpG island CpG island 11661
Tssr24122 2 57181748 to 57181762 14 - TSS region transcription start site region 24122
4930555B11Rik 2 57181831 to 57188257 6426 + lncRNA gene RIKEN cDNA 4930555B11 gene
n-TAcgc8 2 57182078 to 57182149 71 + tRNA gene nuclear encoded tRNA alanine 8 (anticodon CGC)
n-TGgcc8 2 57182394 to 57182464 70 - tRNA gene nuclear encoded tRNA glycine 8 (anticodon GCC)
Atp5k-ps4 2 57214046 to 57214247 201 - pseudogene ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E, pseudogene 4
Gm13526 2 57214054 to 57214242 188 - pseudogene predicted gene 13526
Gm39813 2 57223317 to 57224824 1507 + lncRNA gene predicted gene, 39813
A930012O16Rik 2 57236227 to 57238508 2281 - unclassified non-coding RNA gene RIKEN cDNA A930012O16 gene
Cpgi11662 2 57237633 to 57239087 1454 CpG island CpG island 11662
Tssr17793 2 57237651 to 57237729 78 + TSS region transcription start site region 17793
Gpd2 2 57237678 to 57370719 133041 + protein coding gene glycerol phosphate dehydrogenase 2, mitochondrial
Tssr24123 2 57238310 to 57238346 36 - TSS region transcription start site region 24123
Tssr17794 2 57238414 to 57238425 11 + TSS region transcription start site region 17794
Tssr17795 2 57238427 to 57238459 32 + TSS region transcription start site region 17795
Tssr17796 2 57238463 to 57238482 19 + TSS region transcription start site region 17796
Tssr24124 2 57238758 to 57238764 6 - TSS region transcription start site region 24124
Tssr17797 2 57265101 to 57265130 29 + TSS region transcription start site region 17797
Tssr17798 2 57265137 to 57265158 21 + TSS region transcription start site region 17798
Tssr17799 2 57267359 to 57267363 4 + TSS region transcription start site region 17799
Tssr17800 2 57268518 to 57268536 18 + TSS region transcription start site region 17800
Gm13535 2 57272526 to 57275525 2999 - pseudogene predicted gene 13535
Tssr24125 2 57292443 to 57292461 18 - TSS region transcription start site region 24125
Tssr17801 2 57295813 to 57295817 4 + TSS region transcription start site region 17801
Pbwg1.3 2 57297111 to 65302151 8005040 QTL postnatal body weight growth 1.3
D2Mit433 2 57297111 to 57297283 172 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 433
Tssr24126 2 57297437 to 57297448 11 - TSS region transcription start site region 24126
Tssr24127 2 57297560 to 57297627 67 - TSS region transcription start site region 24127
Tssr24128 2 57297633 to 57297646 13 - TSS region transcription start site region 24128
Tssr17802 2 57317406 to 57317445 39 + TSS region transcription start site region 17802
Tssr17803 2 57330161 to 57330201 40 + TSS region transcription start site region 17803
D2Mit242 2 57349961 to 57350096 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 242
Tssr17804 2 57359758 to 57359763 5 + TSS region transcription start site region 17804
Tssr17805 2 57367463 to 57367474 11 + TSS region transcription start site region 17805
Tssr17806 2 57367494 to 57367528 34 + TSS region transcription start site region 17806
Tssr24129 2 57367638 to 57367672 34 - TSS region transcription start site region 24129
Tssr17807 2 57368417 to 57368432 15 + TSS region transcription start site region 17807
Tssr17808 2 57368448 to 57368465 17 + TSS region transcription start site region 17808
Tssr17809 2 57369306 to 57369318 12 + TSS region transcription start site region 17809
Tssr17810 2 57372656 to 57372665 9 + TSS region transcription start site region 17810
Gm13531 2 57425167 to 57425709 542 - pseudogene predicted gene 13531