Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:5527395-5787407

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Camk1d 2 5293457 to 5714515 421058 - protein coding gene calcium/calmodulin-dependent protein kinase ID
Tssr22410 2 5538681 to 5538716 35 - TSS region transcription start site region 22410
Tssr22411 2 5538731 to 5538744 13 - TSS region transcription start site region 22411
Tssr16004 2 5603551 to 5603565 14 + TSS region transcription start site region 16004
Gm13216 2 5603571 to 5604161 590 + pseudogene predicted gene 13216
Tssr22412 2 5657395 to 5657407 12 - TSS region transcription start site region 22412
Tssr22413 2 5670286 to 5670307 21 - TSS region transcription start site region 22413
Tssr22414 2 5671515 to 5671520 5 - TSS region transcription start site region 22414
Tssr22415 2 5672967 to 5672969 2 - TSS region transcription start site region 22415
Tssr22416 2 5675991 to 5676025 34 - TSS region transcription start site region 22416
Tssr22417 2 5676062 to 5676065 3 - TSS region transcription start site region 22417
Tssr22418 2 5676955 to 5676969 14 - TSS region transcription start site region 22418
Tssr22419 2 5676983 to 5676993 10 - TSS region transcription start site region 22419
Tssr22420 2 5677533 to 5677545 12 - TSS region transcription start site region 22420
Tssr22421 2 5682032 to 5682037 5 - TSS region transcription start site region 22421
Tssr16005 2 5683715 to 5683718 3 + TSS region transcription start site region 16005
Tssr22422 2 5697881 to 5697899 18 - TSS region transcription start site region 22422
Tssr22423 2 5698012 to 5698020 8 - TSS region transcription start site region 22423
Cpgi11167 2 5713678 to 5715321 1643 CpG island CpG island 11167
Tssr22424 2 5714341 to 5714402 61 - TSS region transcription start site region 22424
Tssr22425 2 5714435 to 5714446 11 - TSS region transcription start site region 22425
Tssr22426 2 5714463 to 5714487 24 - TSS region transcription start site region 22426
Tssr22427 2 5714490 to 5714538 48 - TSS region transcription start site region 22427
Gm29857 2 5727992 to 5746476 18484 + lncRNA gene predicted gene, 29857
Cpgi11168 2 5746381 to 5746612 231 CpG island CpG island 11168
Tssr22428 2 5760700 to 5760713 13 - TSS region transcription start site region 22428