Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:54394674-55314712

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46742 2 54422573 to 54436077 13504 - lncRNA gene predicted gene, 46742
Cpgi11653 2 54435936 to 54437250 1314 CpG island CpG island 11653
Galnt13 2 54436317 to 55118309 681992 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 13
Tssr17764 2 54436374 to 54436422 48 + TSS region transcription start site region 17764
Tssr17765 2 54436432 to 54436441 9 + TSS region transcription start site region 17765
Gm24549 2 54565998 to 54566136 138 - snoRNA gene predicted gene, 24549
D2Jpk3 2 54580729 to 54580849 120 DNA segment DNA segment, Chr 2, Japan, Kominami 3
Tssr497 2 54610642 to 54610643 1 + TSS region transcription start site region 497
Tssr17766 2 54854225 to 54854229 4 + TSS region transcription start site region 17766
Tssr17767 2 54854674 to 54854712 38 + TSS region transcription start site region 17767
Tssr17768 2 54905524 to 54905528 4 + TSS region transcription start site region 17768
Gm25489 2 55003985 to 55004125 140 + snRNA gene predicted gene, 25489
D2Mit8 2 55058413 to 55058600 187 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 8
Tssr17769 2 55105567 to 55105570 3 + TSS region transcription start site region 17769
Tssr17770 2 55114231 to 55114244 13 + TSS region transcription start site region 17770
Tssr17771 2 55115764 to 55115776 12 + TSS region transcription start site region 17771
Gm14032 2 55292065 to 55293087 1022 + pseudogene predicted gene 14032
Tssr17772 2 55292149 to 55292177 28 + TSS region transcription start site region 17772
Tssr17773 2 55292346 to 55292379 33 + TSS region transcription start site region 17773
Tssr17774 2 55292470 to 55292501 31 + TSS region transcription start site region 17774
Tssr17775 2 55292968 to 55292987 19 + TSS region transcription start site region 17775
D2Mit323 2 55310916 to 55311040 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 323