Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:53831374-55041422

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9030407C09Rik 2 53877773 to 53879479 1706 unclassified gene RIKEN cDNA 9030407C09 gene
Rprm 2 54084093 to 54085552 1459 - protein coding gene reprimo, TP53 dependent G2 arrest mediator candidate
Cpgi11652 2 54084661 to 54085794 1133 CpG island CpG island 11652
Tssr24104 2 54085407 to 54085418 11 - TSS region transcription start site region 24104
Tssr24105 2 54085489 to 54085541 52 - TSS region transcription start site region 24105
Tssr24106 2 54085542 to 54085559 17 - TSS region transcription start site region 24106
Tssr24107 2 54085562 to 54085573 11 - TSS region transcription start site region 24107
Gm22298 2 54100430 to 54100562 132 + snoRNA gene predicted gene, 22298
Gm13505 2 54240569 to 54241376 807 + pseudogene predicted gene 13505
Gm14035 2 54284037 to 54285475 1438 + pseudogene predicted gene 14035
Gm14034 2 54356341 to 54356891 550 - pseudogene predicted gene 14034
Gm46742 2 54422573 to 54436077 13504 - lncRNA gene predicted gene, 46742
Cpgi11653 2 54435936 to 54437250 1314 CpG island CpG island 11653
Galnt13 2 54436317 to 55118309 681992 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 13
Tssr17764 2 54436374 to 54436422 48 + TSS region transcription start site region 17764
Tssr17765 2 54436432 to 54436441 9 + TSS region transcription start site region 17765
Gm24549 2 54565998 to 54566136 138 - snoRNA gene predicted gene, 24549
D2Jpk3 2 54580729 to 54580849 120 DNA segment DNA segment, Chr 2, Japan, Kominami 3
Tssr497 2 54610642 to 54610643 1 + TSS region transcription start site region 497
Tssr17766 2 54854225 to 54854229 4 + TSS region transcription start site region 17766
Tssr17767 2 54854674 to 54854712 38 + TSS region transcription start site region 17767
Tssr17768 2 54905524 to 54905528 4 + TSS region transcription start site region 17768
Gm25489 2 55003985 to 55004125 140 + snRNA gene predicted gene, 25489