Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:53152509-53643487

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prpf40a 2 53134706 to 53191279 56573 - protein coding gene pre-mRNA processing factor 40A
Tssr24098 2 53153078 to 53153095 17 - TSS region transcription start site region 24098
D2Ertd612e 2 53163300 to 53163502 202 DNA segment DNA segment, Chr 2, ERATO Doi 612, expressed
Tssr24099 2 53190813 to 53190845 32 - TSS region transcription start site region 24099
Cpgi11651 2 53190867 to 53192684 1817 CpG island CpG island 11651
Tssr24100 2 53191195 to 53191209 14 - TSS region transcription start site region 24100
Tssr24101 2 53191214 to 53191260 46 - TSS region transcription start site region 24101
Tssr17757 2 53191466 to 53191480 14 + TSS region transcription start site region 17757
Tssr24102 2 53191970 to 53191985 15 - TSS region transcription start site region 24102
Tssr17758 2 53192067 to 53192100 33 + TSS region transcription start site region 17758
Arl6ip6 2 53192084 to 53219221 27137 + protein coding gene ADP-ribosylation factor-like 6 interacting protein 6
Tssr17759 2 53192101 to 53192128 27 + TSS region transcription start site region 17759
Tssr17760 2 53192166 to 53192177 11 + TSS region transcription start site region 17760
Gm25898 2 53274736 to 53274841 105 - snRNA gene predicted gene, 25898
Gm13501 2 53397509 to 53398487 978 - pseudogene predicted gene 13501
Tssr495 2 53486357 to 53486358 1 + TSS region transcription start site region 495
Gm13503 2 53551926 to 53552371 445 + pseudogene predicted gene 13503
Tssr17761 2 53605134 to 53605141 7 + TSS region transcription start site region 17761
Tssr17762 2 53605144 to 53605152 8 + TSS region transcription start site region 17762
Tssr17763 2 53605159 to 53605163 4 + TSS region transcription start site region 17763
Tssr496 2 53606375 to 53606403 28 + TSS region transcription start site region 496