Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:52599948-52794141

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cacnb4 2 52428320 to 52676609 248289 - protein coding gene calcium channel, voltage-dependent, beta 4 subunit
Tssr24082 2 52615297 to 52615301 4 - TSS region transcription start site region 24082
Tssr17728 2 52619735 to 52619746 11 + TSS region transcription start site region 17728
Bloc1s2-ps 2 52619754 to 52620185 431 + pseudogene biogenesis of lysosomal organelles complex-1, subunit 2, pseudogene
Tssr24083 2 52674742 to 52674745 3 - TSS region transcription start site region 24083
Cpgi11648 2 52675037 to 52676793 1756 CpG island CpG island 11648
Tssr24084 2 52676084 to 52676099 15 - TSS region transcription start site region 24084
Tssr24085 2 52676101 to 52676116 15 - TSS region transcription start site region 24085
Tssr24086 2 52676119 to 52676146 27 - TSS region transcription start site region 24086
Tssr24087 2 52676571 to 52676588 17 - TSS region transcription start site region 24087
Tssr24088 2 52676600 to 52676631 31 - TSS region transcription start site region 24088
Gm46740 2 52676827 to 52679338 2511 + lncRNA gene predicted gene, 46740
Stam2 2 52692206 to 52742149 49943 - protein coding gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Gm46741 2 52696299 to 52699066 2767 - protein coding gene predicted gene, 46741
D2Ertd112e 2 52722719 to 52722954 235 DNA segment DNA segment, Chr 2, ERATO Doi 112, expressed
Tssr24089 2 52730686 to 52730691 5 - TSS region transcription start site region 24089
Tssr17729 2 52732268 to 52732273 5 + TSS region transcription start site region 17729
Gm13548 2 52739071 to 52739455 384 - pseudogene predicted gene 13548
Cpgi11649 2 52741662 to 52743042 1380 CpG island CpG island 11649
Tssr24090 2 52742142 to 52742156 14 - TSS region transcription start site region 24090
Tssr24091 2 52742169 to 52742217 48 - TSS region transcription start site region 24091
Tssr24092 2 52742402 to 52742441 39 - TSS region transcription start site region 24092