Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:5051028-5153438

20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Optn	2	5020642 to 5064051	43409	-	protein coding gene	optineurin
Tssr22395	2	5062944 to 5062954	10	-	TSS region	transcription start site region 22395
Cpgi11164	2	5063549 to 5064446	897		CpG island	CpG island 11164
Tssr392	2	5063618 to 5063626	8	+	TSS region	transcription start site region 392
Tssr22396	2	5063932 to 5063971	39	-	TSS region	transcription start site region 22396
Tssr22397	2	5063975 to 5063986	11	-	TSS region	transcription start site region 22397
Tssr22398	2	5063996 to 5064048	52	-	TSS region	transcription start site region 22398
Tssr22399	2	5064052 to 5064075	23	-	TSS region	transcription start site region 22399
Tssr22400	2	5080567 to 5080573	6	-	TSS region	transcription start site region 22400
Tssr22401	2	5083816 to 5083827	11	-	TSS region	transcription start site region 22401
Tssr22402	2	5083839 to 5083852	13	-	TSS region	transcription start site region 22402
Tssr22403	2	5083863 to 5083872	9	-	TSS region	transcription start site region 22403
Cpgi11165	2	5098066 to 5098268	202		CpG island	CpG island 11165
Gm39755	2	5101028 to 5103438	2410	-	lncRNA gene	predicted gene, 39755
Cpgi11166	2	5137393 to 5138395	1002		CpG island	CpG island 11166
Tssr393	2	5137735 to 5137740	5	+	TSS region	transcription start site region 393
Gm26776	2	5137749 to 5230864	93115	-	lincRNA gene	predicted gene, 26776
Tssr16000	2	5137756 to 5137772	16	+	TSS region	transcription start site region 16000
Ccdc3	2	5137776 to 5230878	93102	+	protein coding gene	coiled-coil domain containing 3
Tssr16001	2	5137850 to 5137868	18	+	TSS region	transcription start site region 16001