Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:50470439-51809111

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13488 2 50521682 to 50521860 178 - pseudogene predicted gene 13488
Gm13487 2 50522124 to 50522987 863 - pseudogene predicted gene 13487
Tssr24016 2 50523028 to 50523038 10 - TSS region transcription start site region 24016
Gm13485 2 50547914 to 50552258 4344 + lincRNA gene predicted gene 13485
Gm46784 2 50566442 to 50582107 15665 + lncRNA gene predicted gene, 46784
Gm13484 2 50657656 to 50658067 411 - pseudogene predicted gene 13484
Gm32232 2 50755929 to 50814503 58574 + lncRNA gene predicted gene, 32232
D2Mit458 2 50854155 to 50854275 120 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 458
Gm39811 2 50894332 to 50922621 28289 - lncRNA gene predicted gene, 39811
Tssr17700 2 50909581 to 50909584 3 + TSS region transcription start site region 17700
Gm13498 2 50909684 to 50911846 2162 + pseudogene predicted gene 13498
Tssr17701 2 50910183 to 50910188 5 + TSS region transcription start site region 17701
Gm32360 2 51072306 to 51088366 16060 - lncRNA gene predicted gene, 32360
Gm39812 2 51083301 to 51105412 22111 + lncRNA gene predicted gene, 39812
Rnd3 2 51130439 to 51149111 18672 - protein coding gene Rho family GTPase 3
Tssr24017 2 51130860 to 51130863 3 - TSS region transcription start site region 24017
Tssr24018 2 51139943 to 51139948 5 - TSS region transcription start site region 24018
Cpgi11642 2 51147032 to 51149350 2318 CpG island CpG island 11642
Tssr24019 2 51149100 to 51149115 15 - TSS region transcription start site region 24019
Gm28639 2 51219382 to 51219862 480 + lincRNA gene predicted gene 28639
Gm13500 2 51231987 to 51232810 823 + pseudogene predicted gene 13500
Gm13497 2 51241831 to 51295945 54114 + lincRNA gene predicted gene 13497
Gm13499 2 51363572 to 51365499 1927 - lincRNA gene predicted gene 13499
1700057H21Rik 2 51421050 to 51437900 16850 - lincRNA gene RIKEN cDNA 1700057H21 gene
Tssr24020 2 51437877 to 51437913 36 - TSS region transcription start site region 24020
Gm32434 2 51438017 to 51447718 9701 + lncRNA gene predicted gene, 32434
Tssr24021 2 51447705 to 51447752 47 - TSS region transcription start site region 24021
Gm23505 2 51493653 to 51493782 129 - snoRNA gene predicted gene, 23505
Tssr492 2 51528878 to 51528880 2 + TSS region transcription start site region 492
Gm13494 2 51544977 to 51546071 1094 + pseudogene predicted gene 13494
Gm13491 2 51604114 to 51604348 234 - pseudogene predicted gene 13491
Tas2r134 2 51627511 to 51628407 896 + protein coding gene taste receptor, type 2, member 134
Gm13490 2 51656966 to 51732009 75043 - lincRNA gene predicted gene 13490
Tssr24022 2 51678186 to 51678190 4 - TSS region transcription start site region 24022
D2Mit243 2 51694208 to 51694329 121 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 243
D2Mit243.1 2 51694274 to 51694473 199 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 243.1