MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:49737688-49998849

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kif5c	2	49619314 to 49774778	155464	+	protein coding gene	kinesin family member 5C
Tssr24011	2	49743711 to 49743725	14	-	TSS region	transcription start site region 24011
Tssr17683	2	49743834 to 49743851	17	+	TSS region	transcription start site region 17683
Tssr17684	2	49744497 to 49744566	69	+	TSS region	transcription start site region 17684
Tssr17685	2	49744571 to 49744588	17	+	TSS region	transcription start site region 17685
Gm46738	2	49744753 to 49746875	2122	-	lncRNA gene	predicted gene, 46738
Cpgi11639	2	49787285 to 49788347	1062		CpG island	CpG island 11639
Tssr490	2	49787666 to 49787675	9	+	TSS region	transcription start site region 490
Tssr17686	2	49787675 to 49787695	20	+	TSS region	transcription start site region 17686
Lypd6b	2	49787688 to 49948849	161161	+	protein coding gene	LY6/PLAUR domain containing 6B
Tssr17687	2	49787711 to 49787725	14	+	TSS region	transcription start site region 17687
Tssr17688	2	49795663 to 49795688	25	+	TSS region	transcription start site region 17688
Gm13480	2	49805976 to 49812948	6972	-	lincRNA gene	predicted gene 13480
Tssr17689	2	49811687 to 49811701	14	+	TSS region	transcription start site region 17689
Tssr17690	2	49846317 to 49846356	39	+	TSS region	transcription start site region 17690
Tssr17691	2	49890357 to 49890361	4	+	TSS region	transcription start site region 17691
Gm25223	2	49906771 to 49906880	109	-	unclassified non-coding RNA gene	predicted gene, 25223
D2Mit373	2	49933014 to 49933136	122		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 373