Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:49571771-50241880

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11638 2 49619094 to 49620147 1053 CpG island CpG island 11638
Tssr17676 2 49619252 to 49619272 20 + TSS region transcription start site region 17676
Tssr17677 2 49619277 to 49619343 66 + TSS region transcription start site region 17677
Kif5c 2 49619314 to 49774778 155464 + protein coding gene kinesin family member 5C
Tssr17678 2 49621871 to 49621874 3 + TSS region transcription start site region 17678
Gm13525 2 49680499 to 49680976 477 + pseudogene predicted gene 13525
Tssr17679 2 49698872 to 49698889 17 + TSS region transcription start site region 17679
Tssr17680 2 49700950 to 49700960 10 + TSS region transcription start site region 17680
Tssr24009 2 49710784 to 49710837 53 - TSS region transcription start site region 24009
Tssr17681 2 49721781 to 49721803 22 + TSS region transcription start site region 17681
Tssr17682 2 49721825 to 49721856 31 + TSS region transcription start site region 17682
Tssr24010 2 49730292 to 49730307 15 - TSS region transcription start site region 24010
Tssr24011 2 49743711 to 49743725 14 - TSS region transcription start site region 24011
Tssr17683 2 49743834 to 49743851 17 + TSS region transcription start site region 17683
Tssr17684 2 49744497 to 49744566 69 + TSS region transcription start site region 17684
Tssr17685 2 49744571 to 49744588 17 + TSS region transcription start site region 17685
Gm46738 2 49744753 to 49746875 2122 - lncRNA gene predicted gene, 46738
Cpgi11639 2 49787285 to 49788347 1062 CpG island CpG island 11639
Tssr490 2 49787666 to 49787675 9 + TSS region transcription start site region 490
Tssr17686 2 49787675 to 49787695 20 + TSS region transcription start site region 17686
Lypd6b 2 49787688 to 49948849 161161 + protein coding gene LY6/PLAUR domain containing 6B
Tssr17687 2 49787711 to 49787725 14 + TSS region transcription start site region 17687
Tssr17688 2 49795663 to 49795688 25 + TSS region transcription start site region 17688
Gm13480 2 49805976 to 49812948 6972 - lincRNA gene predicted gene 13480
Tssr17689 2 49811687 to 49811701 14 + TSS region transcription start site region 17689
Tssr17690 2 49846317 to 49846356 39 + TSS region transcription start site region 17690
Tssr17691 2 49890357 to 49890361 4 + TSS region transcription start site region 17691
Gm25223 2 49906771 to 49906880 109 - unclassified non-coding RNA gene predicted gene, 25223
D2Mit373 2 49933014 to 49933136 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 373
Cpgi11640 2 50065927 to 50067081 1154 CpG island CpG island 11640
Lypd6 2 50066429 to 50193569 127140 + protein coding gene LY6/PLAUR domain containing 6
Tssr17692 2 50066446 to 50066469 23 + TSS region transcription start site region 17692
Tssr17693 2 50066487 to 50066492 5 + TSS region transcription start site region 17693
Tssr491 2 50066521 to 50066528 7 + TSS region transcription start site region 491
Tssr17694 2 50235919 to 50235920 1 + TSS region transcription start site region 17694