Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:4938261-5048300

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phyh 2 4919019 to 4938730 19711 + protein coding gene phytanoyl-CoA hydroxylase
Tssr22389 2 4938382 to 4938406 24 - TSS region transcription start site region 22389
Gm13194 2 4942174 to 4942484 310 + pseudogene predicted gene 13194
Gm13193 2 4956069 to 4956293 224 - pseudogene predicted gene 13193
Tssr22390 2 4956352 to 4956361 9 - TSS region transcription start site region 22390
Gm13192 2 4959545 to 4959752 207 - pseudogene predicted gene 13192
Tssr22391 2 4959774 to 4959778 4 - TSS region transcription start site region 22391
Tssr15997 2 4976113 to 4976164 51 + TSS region transcription start site region 15997
Ucma 2 4976122 to 4985748 9626 + protein coding gene upper zone of growth plate and cartilage matrix associated
Tssr15998 2 4976176 to 4976185 9 + TSS region transcription start site region 15998
D2Mit354 2 4984708 to 4984831 123 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 354
Heal15 2 4984708 to 4984831 123 QTL wound healing/regeneration 15
Mcm10 2 4989714 to 5012791 23077 - protein coding gene minichromosome maintenance 10 replication initiation factor
Tssr22392 2 4993261 to 4993300 39 - TSS region transcription start site region 22392
Tssr15999 2 4994469 to 4994474 5 + TSS region transcription start site region 15999
Tssr22393 2 5001567 to 5001584 17 - TSS region transcription start site region 22393
Cpgi11163 2 5012506 to 5012898 392 CpG island CpG island 11163
Tssr22394 2 5012716 to 5012766 50 - TSS region transcription start site region 22394
A930010G16Rik 2 5018445 to 5019805 1360 unclassified gene RIKEN cDNA A930010G16 gene
Optn 2 5020642 to 5064051 43409 - protein coding gene optineurin
D2Bwg1072e 2 5036296 to 5036513 217 DNA segment DNA segment, Chr 2, Brigham & Women's Genetics 1072 expressed
4930551O13Rik 2 5037280 to 5041133 3853 + antisense lncRNA gene RIKEN cDNA 4930551O13 gene