Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:49297331-49757333

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mbd5 2 48949490 to 49319690 370200 + protein coding gene methyl-CpG binding domain protein 5
Gm13509 2 49308155 to 49309462 1307 + pseudogene predicted gene 13509
Tssr17668 2 49308945 to 49308977 32 + TSS region transcription start site region 17668
D2Mit72 2 49314559 to 49314700 141 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 72
Gm13508 2 49327377 to 49328151 774 - pseudogene predicted gene 13508
Tssr24007 2 49330484 to 49330487 3 - TSS region transcription start site region 24007
Gm25215 2 49398395 to 49398515 120 - snoRNA gene predicted gene, 25215
Cpgi11637 2 49450803 to 49452843 2040 CpG island CpG island 11637
Epc2 2 49451486 to 49551942 100456 + protein coding gene enhancer of polycomb homolog 2
Tssr17669 2 49451488 to 49451559 71 + TSS region transcription start site region 17669
Tssr17670 2 49451842 to 49451849 7 + TSS region transcription start site region 17670
Tssr24008 2 49452861 to 49452874 13 - TSS region transcription start site region 24008
Tssr17671 2 49465929 to 49465931 2 + TSS region transcription start site region 17671
Tssr17672 2 49516803 to 49516804 1 + TSS region transcription start site region 17672
Tssr17673 2 49523609 to 49523613 4 + TSS region transcription start site region 17673
D2Mit376 2 49526896 to 49526990 94 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 376
Tssr17674 2 49527331 to 49527333 2 + TSS region transcription start site region 17674
Tssr17675 2 49562498 to 49562531 33 + TSS region transcription start site region 17675
Cpgi11638 2 49619094 to 49620147 1053 CpG island CpG island 11638
Tssr17676 2 49619252 to 49619272 20 + TSS region transcription start site region 17676
Tssr17677 2 49619277 to 49619343 66 + TSS region transcription start site region 17677
Kif5c 2 49619314 to 49774778 155464 + protein coding gene kinesin family member 5C
Tssr17678 2 49621871 to 49621874 3 + TSS region transcription start site region 17678
Gm13525 2 49680499 to 49680976 477 + pseudogene predicted gene 13525
Tssr17679 2 49698872 to 49698889 17 + TSS region transcription start site region 17679
Tssr17680 2 49700950 to 49700960 10 + TSS region transcription start site region 17680
Tssr24009 2 49710784 to 49710837 53 - TSS region transcription start site region 24009
Tssr17681 2 49721781 to 49721803 22 + TSS region transcription start site region 17681
Tssr17682 2 49721825 to 49721856 31 + TSS region transcription start site region 17682
Tssr24010 2 49730292 to 49730307 15 - TSS region transcription start site region 24010
Tssr24011 2 49743711 to 49743725 14 - TSS region transcription start site region 24011
Tssr17683 2 49743834 to 49743851 17 + TSS region transcription start site region 17683
Tssr17684 2 49744497 to 49744566 69 + TSS region transcription start site region 17684
Tssr17685 2 49744571 to 49744588 17 + TSS region transcription start site region 17685
Gm46738 2 49744753 to 49746875 2122 - lncRNA gene predicted gene, 46738