Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:45116487-45734487

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zeb2 2 44983632 to 45117395 133763 - protein coding gene zinc finger E-box binding homeobox 2
Cpgi11634 2 45116674 to 45117557 883 CpG island CpG island 11634
Tssr23988 2 45116964 to 45116998 34 - TSS region transcription start site region 23988
Tssr17636 2 45117231 to 45117284 53 + TSS region transcription start site region 17636
Tssr23989 2 45117301 to 45117345 44 - TSS region transcription start site region 23989
Tssr23990 2 45117349 to 45117375 26 - TSS region transcription start site region 23990
Tssr23991 2 45117400 to 45117411 11 - TSS region transcription start site region 23991
Tssr23992 2 45117426 to 45117516 90 - TSS region transcription start site region 23992
Tssr23993 2 45117523 to 45117539 16 - TSS region transcription start site region 23993
Tssr17637 2 45133475 to 45133480 5 + TSS region transcription start site region 17637
Gm28643 2 45156925 to 45168467 11542 + lincRNA gene predicted gene 28643
Tssr17638 2 45196752 to 45196785 33 + TSS region transcription start site region 17638
Tssr23994 2 45197386 to 45197402 16 - TSS region transcription start site region 23994
Tssr17639 2 45197733 to 45197744 11 + TSS region transcription start site region 17639
Tssr17640 2 45197755 to 45197778 23 + TSS region transcription start site region 17640
Tssr17641 2 45197779 to 45197790 11 + TSS region transcription start site region 17641
Tssr17642 2 45201602 to 45201636 34 + TSS region transcription start site region 17642
Tssr17643 2 45239290 to 45239304 14 + TSS region transcription start site region 17643
Tssr17644 2 45246810 to 45246831 21 + TSS region transcription start site region 17644
Tssr17645 2 45277030 to 45277090 60 + TSS region transcription start site region 17645
Vis1 2 45280724 to 45280924 200 + unclassified non-coding RNA gene viral integration site 1
Gm13475 2 45329232 to 45329465 233 + pseudogene predicted gene 13475
D2Mit241 2 45338116 to 45338251 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 241
Alcp1 2 45338116 to 68008524 22670408 QTL alcohol preference locus 1, male specific
Gm13479 2 45357265 to 45404035 46770 + lincRNA gene predicted gene 13479
Gm30728 2 45416487 to 45434487 18000 - lncRNA gene predicted gene, 30728
D2Mit88 2 45457623 to 45457804 181 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 88
Gm30792 2 45534757 to 45538320 3563 - lncRNA gene predicted gene, 30792
Tssr23995 2 45559932 to 45559938 6 - TSS region transcription start site region 23995
Gm30848 2 45572710 to 45584425 11715 + lncRNA gene predicted gene, 30848
Gm13478 2 45647191 to 45647603 412 + pseudogene predicted gene 13478
Tssr17646 2 45680039 to 45680042 3 + TSS region transcription start site region 17646
Tssr17647 2 45696593 to 45696611 18 + TSS region transcription start site region 17647
1700019E08Rik 2 45696605 to 45698447 1842 + lincRNA gene RIKEN cDNA 1700019E08 gene
Gm13465 2 45733457 to 45753311 19854 + lincRNA gene predicted gene 13465
Lith1 2 145470727 to 45457623 -100013104 QTL lithogenic gene 1