Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:45091487-45759487

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zeb2 2 44983632 to 45117395 133763 - protein coding gene zinc finger E-box binding homeobox 2
Tssr23950 2 45092484 to 45092495 11 - TSS region transcription start site region 23950
Tssr23951 2 45094250 to 45094267 17 - TSS region transcription start site region 23951
Tssr23952 2 45095914 to 45095954 40 - TSS region transcription start site region 23952
Tssr23953 2 45096782 to 45096798 16 - TSS region transcription start site region 23953
Tssr23954 2 45098749 to 45098773 24 - TSS region transcription start site region 23954
Tssr23955 2 45098866 to 45098889 23 - TSS region transcription start site region 23955
Tssr23956 2 45099396 to 45099419 23 - TSS region transcription start site region 23956
Tssr23957 2 45099472 to 45099486 14 - TSS region transcription start site region 23957
Tssr23958 2 45099573 to 45099588 15 - TSS region transcription start site region 23958
Tssr23959 2 45102129 to 45102155 26 - TSS region transcription start site region 23959
Tssr23960 2 45102189 to 45102252 63 - TSS region transcription start site region 23960
Tssr23961 2 45102477 to 45102494 17 - TSS region transcription start site region 23961
Tssr23962 2 45103548 to 45103549 1 - TSS region transcription start site region 23962
Tssr23963 2 45104232 to 45104252 20 - TSS region transcription start site region 23963
Tssr17625 2 45106192 to 45106213 21 + TSS region transcription start site region 17625
Tssr17626 2 45106275 to 45106283 8 + TSS region transcription start site region 17626
Tssr23964 2 45106896 to 45106907 11 - TSS region transcription start site region 23964
Cpgi11631 2 45108695 to 45108866 171 CpG island CpG island 11631
Cpgi11632 2 45109265 to 45110454 1189 CpG island CpG island 11632
Tssr23965 2 45110040 to 45110049 9 - TSS region transcription start site region 23965
Tssr23966 2 45110073 to 45110104 31 - TSS region transcription start site region 23966
Tssr23967 2 45110142 to 45110165 23 - TSS region transcription start site region 23967
Tssr23968 2 45110167 to 45110183 16 - TSS region transcription start site region 23968
Tssr23969 2 45110198 to 45110207 9 - TSS region transcription start site region 23969
Tssr23970 2 45110215 to 45110234 19 - TSS region transcription start site region 23970
Tssr23971 2 45110241 to 45110265 24 - TSS region transcription start site region 23971
Tssr23972 2 45110268 to 45110295 27 - TSS region transcription start site region 23972
Tssr23973 2 45110336 to 45110376 40 - TSS region transcription start site region 23973
Tssr23974 2 45110377 to 45110388 11 - TSS region transcription start site region 23974
Tssr17627 2 45110445 to 45110457 12 + TSS region transcription start site region 17627
Tssr17628 2 45110472 to 45110495 23 + TSS region transcription start site region 17628
Tssr17629 2 45110972 to 45111008 36 + TSS region transcription start site region 17629
Cpgi11633 2 45111106 to 45111258 152 CpG island CpG island 11633
Tssr23975 2 45111129 to 45111136 7 - TSS region transcription start site region 23975
Zeb2os 2 45111138 to 45114087 2949 + antisense lncRNA gene zinc finger E-box binding homeobox 2, opposite strand
Tssr23976 2 45111139 to 45111155 16 - TSS region transcription start site region 23976
Tssr17630 2 45111150 to 45111166 16 + TSS region transcription start site region 17630
Gm27761 2 45111171 to 45111301 130 + unclassified non-coding RNA gene predicted gene, 27761
Tssr17631 2 45111178 to 45111192 14 + TSS region transcription start site region 17631
Tssr17632 2 45111195 to 45111214 19 + TSS region transcription start site region 17632
Tssr23977 2 45111259 to 45111319 60 - TSS region transcription start site region 23977
Tssr23978 2 45111708 to 45111721 13 - TSS region transcription start site region 23978
Tssr23979 2 45111838 to 45111862 24 - TSS region transcription start site region 23979
Tssr23980 2 45112083 to 45112094 11 - TSS region transcription start site region 23980
Tssr23981 2 45112115 to 45112134 19 - TSS region transcription start site region 23981
Tssr17633 2 45112236 to 45112255 19 + TSS region transcription start site region 17633
Tssr17634 2 45112269 to 45112280 11 + TSS region transcription start site region 17634
Tssr17635 2 45112290 to 45112304 14 + TSS region transcription start site region 17635
Tssr23982 2 45112992 to 45113010 18 - TSS region transcription start site region 23982
Tssr23983 2 45113201 to 45113214 13 - TSS region transcription start site region 23983
Tssr23984 2 45113217 to 45113238 21 - TSS region transcription start site region 23984
Tssr23985 2 45113255 to 45113275 20 - TSS region transcription start site region 23985
Gm27404 2 45113313 to 45113415 102 + unclassified non-coding RNA gene predicted gene, 27404
Tssr23986 2 45113900 to 45113927 27 - TSS region transcription start site region 23986
Gm27645 2 45113908 to 45113984 76 + unclassified non-coding RNA gene predicted gene, 27645
Tssr23987 2 45113929 to 45113952 23 - TSS region transcription start site region 23987
Cpgi11634 2 45116674 to 45117557 883 CpG island CpG island 11634
Tssr23988 2 45116964 to 45116998 34 - TSS region transcription start site region 23988
Tssr17636 2 45117231 to 45117284 53 + TSS region transcription start site region 17636
Tssr23989 2 45117301 to 45117345 44 - TSS region transcription start site region 23989
Tssr23990 2 45117349 to 45117375 26 - TSS region transcription start site region 23990
Tssr23991 2 45117400 to 45117411 11 - TSS region transcription start site region 23991
Tssr23992 2 45117426 to 45117516 90 - TSS region transcription start site region 23992
Tssr23993 2 45117523 to 45117539 16 - TSS region transcription start site region 23993
Tssr17637 2 45133475 to 45133480 5 + TSS region transcription start site region 17637
Gm28643 2 45156925 to 45168467 11542 + lincRNA gene predicted gene 28643
Tssr17638 2 45196752 to 45196785 33 + TSS region transcription start site region 17638
Tssr23994 2 45197386 to 45197402 16 - TSS region transcription start site region 23994
Tssr17639 2 45197733 to 45197744 11 + TSS region transcription start site region 17639
Tssr17640 2 45197755 to 45197778 23 + TSS region transcription start site region 17640
Tssr17641 2 45197779 to 45197790 11 + TSS region transcription start site region 17641
Tssr17642 2 45201602 to 45201636 34 + TSS region transcription start site region 17642
Tssr17643 2 45239290 to 45239304 14 + TSS region transcription start site region 17643
Tssr17644 2 45246810 to 45246831 21 + TSS region transcription start site region 17644
Tssr17645 2 45277030 to 45277090 60 + TSS region transcription start site region 17645
Vis1 2 45280724 to 45280924 200 + unclassified non-coding RNA gene viral integration site 1
Gm13475 2 45329232 to 45329465 233 + pseudogene predicted gene 13475
D2Mit241 2 45338116 to 45338251 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 241
Alcp1 2 45338116 to 68008524 22670408 QTL alcohol preference locus 1, male specific
Gm13479 2 45357265 to 45404035 46770 + lincRNA gene predicted gene 13479
Gm30728 2 45416487 to 45434487 18000 - lncRNA gene predicted gene, 30728
D2Mit88 2 45457623 to 45457804 181 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 88
Gm30792 2 45534757 to 45538320 3563 - lncRNA gene predicted gene, 30792
Tssr23995 2 45559932 to 45559938 6 - TSS region transcription start site region 23995
Gm30848 2 45572710 to 45584425 11715 + lncRNA gene predicted gene, 30848
Gm13478 2 45647191 to 45647603 412 + pseudogene predicted gene 13478
Tssr17646 2 45680039 to 45680042 3 + TSS region transcription start site region 17646
Tssr17647 2 45696593 to 45696611 18 + TSS region transcription start site region 17647
1700019E08Rik 2 45696605 to 45698447 1842 + lincRNA gene RIKEN cDNA 1700019E08 gene
Gm13465 2 45733457 to 45753311 19854 + lincRNA gene predicted gene 13465
Gm13467 2 45747803 to 45751684 3881 - lincRNA gene predicted gene 13467
Lith1 2 145470727 to 45457623 -100013104 QTL lithogenic gene 1