Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:44126772-44987341

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq6 2 31313023 to 44618192 13305169 QTL conditioned fear QTL 6
Arhgap15 2 43748824 to 44395953 647129 + protein coding gene Rho GTPase activating protein 15
Tssr17611 2 44160234 to 44160237 3 + TSS region transcription start site region 17611
Tssr17612 2 44160884 to 44160894 10 + TSS region transcription start site region 17612
A430068E04Rik 2 44201369 to 44204948 3579 unclassified gene RIKEN cDNA A430068E04 gene
Tssr17613 2 44243127 to 44243155 28 + TSS region transcription start site region 17613
Tssr17614 2 44310611 to 44310612 1 + TSS region transcription start site region 17614
Tssr17615 2 44335879 to 44335888 9 + TSS region transcription start site region 17615
Tssr17616 2 44335920 to 44335933 13 + TSS region transcription start site region 17616
Tssr17617 2 44341762 to 44341767 5 + TSS region transcription start site region 17617
Gm22867 2 44428935 to 44429043 108 + snRNA gene predicted gene, 22867
Gm39805 2 44432260 to 44462504 30244 + lncRNA gene predicted gene, 39805
Gm39806 2 44495300 to 44501041 5741 - lncRNA gene predicted gene, 39806
Tssr23875 2 44539372 to 44539379 7 - TSS region transcription start site region 23875
Cpgi11627 2 44556772 to 44557341 569 CpG island CpG island 11627
Gtdc1 2 44564412 to 44927657 363245 - protein coding gene glycosyltransferase-like domain containing 1
Tssr23876 2 44635237 to 44635252 15 - TSS region transcription start site region 23876
Gm39807 2 44667569 to 44668705 1136 - lncRNA gene predicted gene, 39807
Gm13477 2 44788265 to 44790951 2686 + pseudogene predicted gene 13477
Tssr23877 2 44920653 to 44920678 25 - TSS region transcription start site region 23877
Cpgi11628 2 44926380 to 44927811 1431 CpG island CpG island 11628
Tssr23878 2 44926891 to 44926899 8 - TSS region transcription start site region 23878
Tssr23879 2 44927194 to 44927205 11 - TSS region transcription start site region 23879
Tssr23880 2 44927206 to 44927239 33 - TSS region transcription start site region 23880
Tssr23881 2 44927284 to 44927317 33 - TSS region transcription start site region 23881
Tssr17618 2 44927358 to 44927419 61 + TSS region transcription start site region 17618
Tssr17619 2 44927435 to 44927446 11 + TSS region transcription start site region 17619
Tssr17620 2 44956606 to 44956644 38 + TSS region transcription start site region 17620
Tssr17621 2 44957408 to 44957414 6 + TSS region transcription start site region 17621
Zeb2 2 44983632 to 45117395 133763 - protein coding gene zinc finger E-box binding homeobox 2
Tssr23882 2 44983902 to 44983906 4 - TSS region transcription start site region 23882
Tssr23883 2 44984561 to 44984574 13 - TSS region transcription start site region 23883
Tssr23884 2 44984606 to 44984617 11 - TSS region transcription start site region 23884
Tssr23885 2 44985189 to 44985200 11 - TSS region transcription start site region 23885
Tssr23886 2 44986477 to 44986488 11 - TSS region transcription start site region 23886
Tssr23887 2 44986495 to 44986506 11 - TSS region transcription start site region 23887
Tssr23888 2 44986534 to 44986560 26 - TSS region transcription start site region 23888
Tssr23889 2 44986586 to 44986607 21 - TSS region transcription start site region 23889
Tssr23890 2 44986609 to 44986625 16 - TSS region transcription start site region 23890